Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2CP19387 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR2CP19387 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.39■□□□□ 0.7
POLR2CP19387 AL391422.3-201ENST00000603791 2761 ntBASIC19.39■□□□□ 0.7
POLR2CP19387 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2CP19387 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
POLR2CP19387 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2CP19387 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2CP19387 AC098590.1-201ENST00000468126 897 ntBASIC19.39■□□□□ 0.69
POLR2CP19387 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.39■□□□□ 0.69
POLR2CP19387 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
POLR2CP19387 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2CP19387 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2CP19387 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2CP19387 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2CP19387 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2CP19387 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2CP19387 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2CP19387 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2CP19387 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2CP19387 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2CP19387 PTBP1P-201ENST00000554374 1601 ntBASIC19.38■□□□□ 0.69
POLR2CP19387 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2CP19387 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.38■□□□□ 0.69
POLR2CP19387 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR2CP19387 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2CP19387 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 AC142381.4-202ENST00000563973 229 ntBASIC19.37■□□□□ 0.69
POLR2CP19387 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR2CP19387 AC069544.1-201ENST00000609399 999 ntBASIC19.37■□□□□ 0.69
POLR2CP19387 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
POLR2CP19387 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
POLR2CP19387 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.37■□□□□ 0.69
POLR2CP19387 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2CP19387 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR2CP19387 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR2CP19387 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
POLR2CP19387 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.36■□□□□ 0.69
POLR2CP19387 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 HLA-G-202ENST00000376815 851 ntBASIC19.36■□□□□ 0.69
POLR2CP19387 HLA-G-203ENST00000376818 1127 ntBASIC19.36■□□□□ 0.69
POLR2CP19387 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
POLR2CP19387 AL158047.1-201ENST00000445918 881 ntBASIC19.36■□□□□ 0.69
POLR2CP19387 RPS2P52-201ENST00000469610 820 ntBASIC19.36■□□□□ 0.69
POLR2CP19387 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
POLR2CP19387 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR2CP19387 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR2CP19387 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.36■□□□□ 0.69
POLR2CP19387 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
POLR2CP19387 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
POLR2CP19387 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
POLR2CP19387 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2CP19387 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
POLR2CP19387 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
POLR2CP19387 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
POLR2CP19387 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.35■□□□□ 0.69
POLR2CP19387 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
POLR2CP19387 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2CP19387 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
POLR2CP19387 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.35■□□□□ 0.69
POLR2CP19387 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
POLR2CP19387 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms