Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ATF1P18846 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.55■□□□□ 0.4
ATF1P18846 KRT18P14-201ENST00000534205 1250 ntBASIC17.55■□□□□ 0.4
ATF1P18846 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.55■□□□□ 0.4
ATF1P18846 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATF1P18846 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATF1P18846 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.54■□□□□ 0.4
ATF1P18846 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.54■□□□□ 0.4
ATF1P18846 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.54■□□□□ 0.4
ATF1P18846 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.54■□□□□ 0.4
ATF1P18846 AC243732.1-201ENST00000612648 864 ntBASIC17.54■□□□□ 0.4
ATF1P18846 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.54■□□□□ 0.4
ATF1P18846 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.54■□□□□ 0.4
ATF1P18846 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.54■□□□□ 0.4
ATF1P18846 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATF1P18846 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATF1P18846 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATF1P18846 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF1P18846 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATF1P18846 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ATF1P18846 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATF1P18846 AC091799.1-201ENST00000422823 811 ntBASIC17.53■□□□□ 0.4
ATF1P18846 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.53■□□□□ 0.4
ATF1P18846 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATF1P18846 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF1P18846 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.53■□□□□ 0.4
ATF1P18846 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 AC004854.2-201ENST00000608450 1441 ntBASIC17.53■□□□□ 0.4
ATF1P18846 RBM17P2-201ENST00000616397 1405 ntBASIC17.53■□□□□ 0.4
ATF1P18846 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.53■□□□□ 0.4
ATF1P18846 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
ATF1P18846 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATF1P18846 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
ATF1P18846 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.52■□□□□ 0.4
ATF1P18846 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATF1P18846 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms