Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 BST1YFL025C 3090 nt1.73□□□□□ -2.13
SRD1P09007 YJL150WYJL150W 303 nt1.72□□□□□ -2.13
SRD1P09007 snR46snR46 197 nt1.72□□□□□ -2.13
SRD1P09007 YLR422WYLR422W 5799 nt1.71□□□□□ -2.14
SRD1P09007 APL1YJR005W 2103 nt1.71□□□□□ -2.14
SRD1P09007 YAR009CYAR009C 3591 nt1.71□□□□□ -2.14
SRD1P09007 YLR419WYLR419W 4308 nt1.7□□□□□ -2.14
SRD1P09007 YJL026C-AYJL026C-A 222 nt1.7□□□□□ -2.14
SRD1P09007 SMC1YFL008W 3678 nt1.69□□□□□ -2.14
SRD1P09007 YDL007C-AYDL007C-A 258 nt1.69□□□□□ -2.14
SRD1P09007 RPL33BYOR234C 324 nt1.68□□□□□ -2.14
SRD1P09007 CDC31YOR257W 486 nt1.68□□□□□ -2.14
SRD1P09007 snR52snR52 92 nt1.68□□□□□ -2.14
SRD1P09007 PRP39YML046W 1890 nt1.68□□□□□ -2.14
SRD1P09007 CHS1YNL192W 3396 nt1.67□□□□□ -2.14
SRD1P09007 PAA1YDR071C 576 nt1.66□□□□□ -2.14
SRD1P09007 YNL338WYNL338W 159 nt1.66□□□□□ -2.14
SRD1P09007 STO1YMR125W 2586 nt1.66□□□□□ -2.14
SRD1P09007 HAL9YOL089C 3093 nt1.66□□□□□ -2.14
SRD1P09007 MDS3YGL197W 4464 nt1.66□□□□□ -2.14
SRD1P09007 SWI4YER111C 3282 nt1.65□□□□□ -2.14
SRD1P09007 SET3YKR029C 2256 nt1.65□□□□□ -2.14
SRD1P09007 CLU1YMR012W 3834 nt1.65□□□□□ -2.15
SRD1P09007 YAL067W-AYAL067W-A 228 nt1.64□□□□□ -2.15
SRD1P09007 YNL211CYNL211C 261 nt1.64□□□□□ -2.15
SRD1P09007 RSM22YKL155C 1887 nt1.64□□□□□ -2.15
SRD1P09007 POL5YEL055C 3069 nt1.63□□□□□ -2.15
SRD1P09007 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
SRD1P09007 YBR221W-AYBR221W-A 105 nt1.63□□□□□ -2.15
SRD1P09007 TTI1YKL033W 3117 nt1.62□□□□□ -2.15
SRD1P09007 TRS65YGR166W 1683 nt1.62□□□□□ -2.15
SRD1P09007 EST2YLR318W 2655 nt1.62□□□□□ -2.15
SRD1P09007 SXM1YDR395W 2835 nt1.62□□□□□ -2.15
SRD1P09007 YEL073CYEL073C 324 nt1.62□□□□□ -2.15
SRD1P09007 RPS30BYOR182C 192 nt1.62□□□□□ -2.15
SRD1P09007 NUP145YGL092W 3954 nt1.62□□□□□ -2.15
SRD1P09007 ATP8Q0080 147 nt1.61□□□□□ -2.15
SRD1P09007 APL3YBL037W 3078 nt1.61□□□□□ -2.15
SRD1P09007 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
SRD1P09007 WAR1YML076C 2835 nt1.61□□□□□ -2.15
SRD1P09007 COY1YKL179C 2040 nt1.61□□□□□ -2.15
SRD1P09007 MSH3YCR092C 3057 nt1.6□□□□□ -2.15
SRD1P09007 EAF1YDR359C 2949 nt1.6□□□□□ -2.15
SRD1P09007 COX12YLR038C 252 nt1.6□□□□□ -2.15
SRD1P09007 PMD1YER132C 5262 nt1.6□□□□□ -2.15
SRD1P09007 MSN5YDR335W 3675 nt1.59□□□□□ -2.16
SRD1P09007 FIG2YCR089W 4830 nt1.58□□□□□ -2.16
SRD1P09007 ROM2YLR371W 4071 nt1.58□□□□□ -2.16
SRD1P09007 YIL134C-AYIL134C-A 204 nt1.58□□□□□ -2.16
SRD1P09007 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
SRD1P09007 CDC25YLR310C 4770 nt1.57□□□□□ -2.16
SRD1P09007 PMP1YCR024C-A 123 nt1.57□□□□□ -2.16
SRD1P09007 TRM732YMR259C 4263 nt1.57□□□□□ -2.16
SRD1P09007 NUP188YML103C 4968 nt1.56□□□□□ -2.16
SRD1P09007 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
SRD1P09007 CMC4YMR194C-B 222 nt1.55□□□□□ -2.16
SRD1P09007 YOR381W-AYOR381W-A 168 nt1.55□□□□□ -2.16
SRD1P09007 NOP9YJL010C 2001 nt1.54□□□□□ -2.16
SRD1P09007 YCR038W-AYCR038W-A 126 nt1.54□□□□□ -2.16
SRD1P09007 YIL002W-AYIL002W-A 210 nt1.53□□□□□ -2.16
SRD1P09007 YKL100W-AYKL100W-A 90 nt1.53□□□□□ -2.16
SRD1P09007 YLL020CYLL020C 306 nt1.53□□□□□ -2.16
SRD1P09007 SEC3YER008C 4011 nt1.53□□□□□ -2.17
SRD1P09007 YGL123C-AYGL123C-A 231 nt1.52□□□□□ -2.17
SRD1P09007 YPL044CYPL044C 549 nt1.52□□□□□ -2.17
SRD1P09007 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
SRD1P09007 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
SRD1P09007 LAA1YJL207C 6045 nt1.51□□□□□ -2.17
SRD1P09007 YBL053WYBL053W 375 nt1.5□□□□□ -2.17
SRD1P09007 YNL170WYNL170W 396 nt1.49□□□□□ -2.17
SRD1P09007 YOR170WYOR170W 306 nt1.49□□□□□ -2.17
SRD1P09007 GEA2YEL022W 4380 nt1.49□□□□□ -2.17
SRD1P09007 RPL26BYGR034W 384 nt1.48□□□□□ -2.17
SRD1P09007 COX5BYIL111W 456 nt1.48□□□□□ -2.17
SRD1P09007 SSK2YNR031C 4740 nt1.48□□□□□ -2.17
SRD1P09007 NUP157YER105C 4176 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)E1tH(GUG)E1 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)E2tH(GUG)E2 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)G1tH(GUG)G1 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)G2tH(GUG)G2 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)HtH(GUG)H 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)KtH(GUG)K 72 nt1.47□□□□□ -2.17
SRD1P09007 tH(GUG)MtH(GUG)M 72 nt1.47□□□□□ -2.17
SRD1P09007 Q0143Q0143 153 nt1.46□□□□□ -2.18
SRD1P09007 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
SRD1P09007 YLR282CYLR282C 342 nt1.46□□□□□ -2.18
SRD1P09007 YGR130CYGR130C 2451 nt1.45□□□□□ -2.18
SRD1P09007 YER053C-AYER053C-A 114 nt1.45□□□□□ -2.18
SRD1P09007 PRP5YBR237W 2550 nt1.45□□□□□ -2.18
SRD1P09007 STB6YKL072W 2301 nt1.44□□□□□ -2.18
SRD1P09007 SDH6YDR379C-A 240 nt1.44□□□□□ -2.18
SRD1P09007 UTP8YGR128C 2142 nt1.44□□□□□ -2.18
SRD1P09007 YOR161W-AYOR161W-A 81 nt1.44□□□□□ -2.18
SRD1P09007 PRP42YDR235W 1635 nt1.44□□□□□ -2.18
SRD1P09007 YML002WYML002W 2214 nt1.43□□□□□ -2.18
SRD1P09007 PIK1YNL267W 3201 nt1.43□□□□□ -2.18
SRD1P09007 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
SRD1P09007 BFR2YDR299W 1605 nt1.42□□□□□ -2.18
SRD1P09007 snR190snR190 190 nt1.41□□□□□ -2.18
SRD1P09007 SEC21YNL287W 2808 nt1.4□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms