Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP2P08253 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP2P08253 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP2P08253 PCDHAC2-203ENST00000615316 3011 ntBASIC20.21■□□□□ 0.83
MMP2P08253 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.21■□□□□ 0.83
MMP2P08253 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
MMP2P08253 AC060766.5-201ENST00000590539 871 ntBASIC20.21■□□□□ 0.83
MMP2P08253 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP2P08253 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
MMP2P08253 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP2P08253 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP2P08253 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MMP2P08253 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 HLA-G-202ENST00000376815 851 ntBASIC20.2■□□□□ 0.82
MMP2P08253 HLA-G-203ENST00000376818 1127 ntBASIC20.2■□□□□ 0.82
MMP2P08253 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP2P08253 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MMP2P08253 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
MMP2P08253 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP2P08253 AC092368.3-202ENST00000574180 1591 ntBASIC20.2■□□□□ 0.82
MMP2P08253 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP2P08253 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP2P08253 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP2P08253 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP2P08253 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP2P08253 PNMA6B-201ENST00000538162 1200 ntBASIC20.19■□□□□ 0.82
MMP2P08253 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.19■□□□□ 0.82
MMP2P08253 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP2P08253 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MMP2P08253 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP2P08253 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP2P08253 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP2P08253 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
MMP2P08253 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.18■□□□□ 0.82
MMP2P08253 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MMP2P08253 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.18■□□□□ 0.82
MMP2P08253 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 AC006557.6-201ENST00000623071 864 ntBASIC20.18■□□□□ 0.82
MMP2P08253 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms