Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RHOP08100 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOP08100 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.84■□□□□ 0.93
RHOP08100 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RHOP08100 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOP08100 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 RBM17P1-201ENST00000453646 1190 ntBASIC20.84■□□□□ 0.93
RHOP08100 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.84■□□□□ 0.93
RHOP08100 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.84■□□□□ 0.93
RHOP08100 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOP08100 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RHOP08100 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.84■□□□□ 0.93
RHOP08100 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOP08100 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOP08100 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
RHOP08100 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOP08100 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RHOP08100 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RHOP08100 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.83■□□□□ 0.93
RHOP08100 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
RHOP08100 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.83■□□□□ 0.93
RHOP08100 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.83■□□□□ 0.93
RHOP08100 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.83■□□□□ 0.93
RHOP08100 REXO1L10P-201ENST00000615707 1290 ntBASIC20.83■□□□□ 0.93
RHOP08100 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RHOP08100 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHOP08100 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHOP08100 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHOP08100 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RHOP08100 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOP08100 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHOP08100 KRT8P17-201ENST00000453110 1448 ntBASIC20.82■□□□□ 0.92
RHOP08100 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RHOP08100 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.82■□□□□ 0.92
RHOP08100 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.82■□□□□ 0.92
RHOP08100 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOP08100 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOP08100 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.82■□□□□ 0.92
RHOP08100 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.82■□□□□ 0.92
RHOP08100 AC079598.2-202ENST00000546624 1451 ntBASIC20.81■□□□□ 0.92
RHOP08100 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
RHOP08100 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RHOP08100 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.81■□□□□ 0.92
RHOP08100 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RHOP08100 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.81■□□□□ 0.92
RHOP08100 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RHOP08100 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOP08100 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RHOP08100 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RHOP08100 UNC93B2-201ENST00000285383 730 ntBASIC20.8■□□□□ 0.92
RHOP08100 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.8■□□□□ 0.92
RHOP08100 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.8■□□□□ 0.92
RHOP08100 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.8■□□□□ 0.92
RHOP08100 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.8■□□□□ 0.92
RHOP08100 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.8■□□□□ 0.92
RHOP08100 AP000525.1-201ENST00000608286 694 ntBASIC20.8■□□□□ 0.92
RHOP08100 CR392000.1-201ENST00000624770 1228 ntBASIC20.8■□□□□ 0.92
RHOP08100 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RHOP08100 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RHOP08100 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHOP08100 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
RHOP08100 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.8■□□□□ 0.92
RHOP08100 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.79■□□□□ 0.92
RHOP08100 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RHOP08100 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 AF106564.1-201ENST00000607058 2553 ntBASIC20.79■□□□□ 0.92
RHOP08100 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHOP08100 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms