Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.7■□□□□ 0.42
ERCC1P07992 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC1P07992 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC1P07992 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC1P07992 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ERCC1P07992 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ERCC1P07992 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
ERCC1P07992 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ERCC1P07992 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.69■□□□□ 0.42
ERCC1P07992 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 AC073210.2-201ENST00000430369 194 ntBASIC17.69■□□□□ 0.42
ERCC1P07992 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.69■□□□□ 0.42
ERCC1P07992 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ERCC1P07992 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 AL391422.3-201ENST00000603791 2761 ntBASIC17.69■□□□□ 0.42
ERCC1P07992 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
ERCC1P07992 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 PCDHAC2-203ENST00000615316 3011 ntBASIC17.69■□□□□ 0.42
ERCC1P07992 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC1P07992 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ERCC1P07992 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ERCC1P07992 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC1P07992 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
ERCC1P07992 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.68■□□□□ 0.42
ERCC1P07992 GUSBP6-202ENST00000438529 1198 ntBASIC17.68■□□□□ 0.42
ERCC1P07992 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.68■□□□□ 0.42
ERCC1P07992 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC1P07992 AC016405.3-201ENST00000607710 860 ntBASIC17.68■□□□□ 0.42
ERCC1P07992 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC1P07992 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC1P07992 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ERCC1P07992 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC1P07992 RARRES2P4-201ENST00000514074 484 ntBASIC17.67■□□□□ 0.42
ERCC1P07992 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC1P07992 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.67■□□□□ 0.42
ERCC1P07992 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC1P07992 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC1P07992 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC1P07992 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC1P07992 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ERCC1P07992 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC1P07992 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC1P07992 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERCC1P07992 AC099778.1-201ENST00000568593 1911 ntBASIC17.66■□□□□ 0.42
ERCC1P07992 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms