Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 RCN1P1-201ENST00000400413 996 ntBASIC24.27■■□□□ 1.48
COL1A1P02452 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.27■■□□□ 1.48
COL1A1P02452 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.27■■□□□ 1.48
COL1A1P02452 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
COL1A1P02452 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.27■■□□□ 1.48
COL1A1P02452 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
COL1A1P02452 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
COL1A1P02452 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.26■■□□□ 1.47
COL1A1P02452 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
COL1A1P02452 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL1A1P02452 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL1A1P02452 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL1A1P02452 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.26■■□□□ 1.47
COL1A1P02452 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.26■■□□□ 1.47
COL1A1P02452 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
COL1A1P02452 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.25■■□□□ 1.47
COL1A1P02452 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
COL1A1P02452 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.25■■□□□ 1.47
COL1A1P02452 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
COL1A1P02452 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
COL1A1P02452 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.25■■□□□ 1.47
COL1A1P02452 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.25■■□□□ 1.47
COL1A1P02452 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 KRT8P20-201ENST00000423953 1409 ntBASIC24.24■■□□□ 1.47
COL1A1P02452 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.24■■□□□ 1.47
COL1A1P02452 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.24■■□□□ 1.47
COL1A1P02452 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.24■■□□□ 1.47
COL1A1P02452 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL1A1P02452 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.24■■□□□ 1.47
COL1A1P02452 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL1A1P02452 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL1A1P02452 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL1A1P02452 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.23■■□□□ 1.47
COL1A1P02452 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.23■■□□□ 1.47
COL1A1P02452 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
COL1A1P02452 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL1A1P02452 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 TSPY15P-201ENST00000457163 923 ntBASIC24.23■■□□□ 1.47
COL1A1P02452 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.23■■□□□ 1.47
COL1A1P02452 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.23■■□□□ 1.47
COL1A1P02452 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
COL1A1P02452 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL1A1P02452 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
COL1A1P02452 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.22■■□□□ 1.47
COL1A1P02452 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.22■■□□□ 1.47
COL1A1P02452 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
COL1A1P02452 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL1A1P02452 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.21■■□□□ 1.47
COL1A1P02452 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
COL1A1P02452 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL1A1P02452 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.21■■□□□ 1.47
COL1A1P02452 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
COL1A1P02452 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL1A1P02452 NBPF21P-201ENST00000425093 1451 ntBASIC24.21■■□□□ 1.47
COL1A1P02452 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL1A1P02452 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL1A1P02452 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL1A1P02452 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
COL1A1P02452 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
COL1A1P02452 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL1A1P02452 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.2■■□□□ 1.47
COL1A1P02452 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL1A1P02452 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL1A1P02452 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.47
COL1A1P02452 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.2■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms