Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CD4P01730 LINC00565-201ENST00000562710 2331 ntBASIC22.22■■□□□ 1.15
CD4P01730 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.21■■□□□ 1.15
CD4P01730 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CD4P01730 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.21■■□□□ 1.15
CD4P01730 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 MIR1238-201ENST00000408483 83 ntBASIC22.21■■□□□ 1.15
CD4P01730 AC113347.1-201ENST00000413321 391 ntBASIC22.21■■□□□ 1.15
CD4P01730 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.21■■□□□ 1.15
CD4P01730 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.21■■□□□ 1.15
CD4P01730 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.21■■□□□ 1.15
CD4P01730 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.21■■□□□ 1.15
CD4P01730 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.21■■□□□ 1.15
CD4P01730 AL031963.3-201ENST00000606441 850 ntBASIC22.21■■□□□ 1.15
CD4P01730 AC004264.1-201ENST00000608354 794 ntBASIC22.21■■□□□ 1.15
CD4P01730 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 KRT8P36-201ENST00000489121 1440 ntBASIC22.21■■□□□ 1.15
CD4P01730 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CD4P01730 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CD4P01730 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CD4P01730 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD4P01730 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD4P01730 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.2■■□□□ 1.14
CD4P01730 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD4P01730 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD4P01730 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.2■■□□□ 1.14
CD4P01730 LINC01568-207ENST00000641790 1380 ntBASIC22.2■■□□□ 1.14
CD4P01730 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD4P01730 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CD4P01730 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.2■■□□□ 1.14
CD4P01730 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CD4P01730 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.19■■□□□ 1.14
CD4P01730 AP002982.1-201ENST00000492365 877 ntBASIC22.19■■□□□ 1.14
CD4P01730 AC116562.2-201ENST00000507042 360 ntBASIC22.19■■□□□ 1.14
CD4P01730 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.19■■□□□ 1.14
CD4P01730 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.19■■□□□ 1.14
CD4P01730 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.19■■□□□ 1.14
CD4P01730 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD4P01730 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD4P01730 AC073508.3-201ENST00000619697 1419 ntBASIC22.19■■□□□ 1.14
CD4P01730 CYP2D8P-201ENST00000433633 1490 ntBASIC22.19■■□□□ 1.14
CD4P01730 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CD4P01730 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CD4P01730 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.18■■□□□ 1.14
CD4P01730 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CD4P01730 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.18■■□□□ 1.14
CD4P01730 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.18■■□□□ 1.14
CD4P01730 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.18■■□□□ 1.14
CD4P01730 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.18■■□□□ 1.14
CD4P01730 FITM1-202ENST00000559294 800 ntBASIC22.18■■□□□ 1.14
CD4P01730 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.18■■□□□ 1.14
CD4P01730 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.18■■□□□ 1.14
CD4P01730 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD4P01730 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 AC027702.1-201ENST00000563810 1770 ntBASIC22.17■■□□□ 1.14
CD4P01730 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 AL024507.2-201ENST00000606070 2574 ntBASIC22.17■■□□□ 1.14
CD4P01730 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.17■■□□□ 1.14
CD4P01730 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.17■■□□□ 1.14
CD4P01730 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CD4P01730 AC010947.1-201ENST00000623454 693 ntBASIC22.17■■□□□ 1.14
CD4P01730 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CD4P01730 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD4P01730 AL049796.1-201ENST00000565336 1766 ntBASIC22.17■■□□□ 1.14
CD4P01730 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.16■■□□□ 1.14
CD4P01730 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.16■■□□□ 1.14
CD4P01730 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CD4P01730 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CD4P01730 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CD4P01730 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CD4P01730 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD4P01730 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD4P01730 TERF1P1-201ENST00000311003 1181 ntBASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms