Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A2O94788 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A2O94788 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALDH1A2O94788 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A2O94788 AL162377.1-201ENST00000618844 1793 ntBASIC20.79■□□□□ 0.92
ALDH1A2O94788 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A2O94788 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A2O94788 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A2O94788 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 FP700111.2-201ENST00000619190 1892 ntBASIC20.78■□□□□ 0.92
ALDH1A2O94788 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 AC105020.6-201ENST00000621523 1217 ntBASIC20.78■□□□□ 0.92
ALDH1A2O94788 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A2O94788 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A2O94788 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.77■□□□□ 0.92
ALDH1A2O94788 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A2O94788 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A2O94788 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A2O94788 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.77■□□□□ 0.91
ALDH1A2O94788 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A2O94788 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 AC069544.1-201ENST00000609399 999 ntBASIC20.76■□□□□ 0.91
ALDH1A2O94788 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 AC116050.2-201ENST00000612102 1779 ntBASIC20.76■□□□□ 0.91
ALDH1A2O94788 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A2O94788 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ALDH1A2O94788 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.75■□□□□ 0.91
ALDH1A2O94788 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 POM121L13P-201ENST00000422362 380 ntBASIC20.75■□□□□ 0.91
ALDH1A2O94788 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.75■□□□□ 0.91
ALDH1A2O94788 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ALDH1A2O94788 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.75■□□□□ 0.91
ALDH1A2O94788 MIR4497-201ENST00000583208 89 ntBASIC20.75■□□□□ 0.91
ALDH1A2O94788 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.75■□□□□ 0.91
ALDH1A2O94788 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A2O94788 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms