Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
USP12O75317 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
USP12O75317 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP12O75317 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.46■□□□□ 0.87
USP12O75317 MCRIP2P1-201ENST00000394346 511 ntBASIC20.46■□□□□ 0.87
USP12O75317 AC093787.1-201ENST00000450396 207 ntBASIC20.46■□□□□ 0.87
USP12O75317 AC069236.1-201ENST00000604339 616 ntBASIC20.46■□□□□ 0.87
USP12O75317 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.46■□□□□ 0.87
USP12O75317 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.46■□□□□ 0.87
USP12O75317 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.46■□□□□ 0.87
USP12O75317 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.46■□□□□ 0.87
USP12O75317 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP12O75317 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.45■□□□□ 0.86
USP12O75317 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 MKRN4P-201ENST00000444706 1521 ntBASIC20.45■□□□□ 0.86
USP12O75317 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.45■□□□□ 0.86
USP12O75317 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 ITM2C-210ENST00000620962 501 ntBASIC20.45■□□□□ 0.86
USP12O75317 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.45■□□□□ 0.86
USP12O75317 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.45■□□□□ 0.86
USP12O75317 AC008694.1-202ENST00000636953 945 ntBASIC20.45■□□□□ 0.86
USP12O75317 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
USP12O75317 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP12O75317 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
USP12O75317 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 MIPEPP3-201ENST00000412105 444 ntBASIC20.44■□□□□ 0.86
USP12O75317 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.44■□□□□ 0.86
USP12O75317 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
USP12O75317 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.44■□□□□ 0.86
USP12O75317 TCF3P1-201ENST00000423021 1937 ntBASIC20.44■□□□□ 0.86
USP12O75317 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP12O75317 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.44■□□□□ 0.86
USP12O75317 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.43■□□□□ 0.86
USP12O75317 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
USP12O75317 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.43■□□□□ 0.86
USP12O75317 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP12O75317 AC100791.3-201ENST00000617619 330 ntBASIC20.43■□□□□ 0.86
USP12O75317 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP12O75317 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP12O75317 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.43■□□□□ 0.86
USP12O75317 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP12O75317 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP12O75317 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
USP12O75317 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP12O75317 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.42■□□□□ 0.86
USP12O75317 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 KRT18P68-201ENST00000392293 1000 ntBASIC20.42■□□□□ 0.86
USP12O75317 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.42■□□□□ 0.86
USP12O75317 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.42■□□□□ 0.86
USP12O75317 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.42■□□□□ 0.86
USP12O75317 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.42■□□□□ 0.86
USP12O75317 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
USP12O75317 CYP2T3P-201ENST00000601990 817 ntBASIC20.42■□□□□ 0.86
USP12O75317 AC010980.2-201ENST00000587099 1412 ntBASIC20.42■□□□□ 0.86
USP12O75317 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.42■□□□□ 0.86
USP12O75317 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP12O75317 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.42■□□□□ 0.86
USP12O75317 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP12O75317 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
USP12O75317 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP12O75317 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP12O75317 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms