Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 MIR4651-201ENST00000582622 73 ntBASIC20.36■□□□□ 0.85
PRAMEF11O60813 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF11O60813 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF11O60813 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 AP003097.1-201ENST00000530657 1135 ntBASIC20.35■□□□□ 0.85
PRAMEF11O60813 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 AC008403.3-201ENST00000598924 454 ntBASIC20.35■□□□□ 0.85
PRAMEF11O60813 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF11O60813 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEF11O60813 AL391422.3-201ENST00000603791 2761 ntBASIC20.34■□□□□ 0.85
PRAMEF11O60813 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 AC026366.1-201ENST00000488803 879 ntBASIC20.34■□□□□ 0.85
PRAMEF11O60813 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF11O60813 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF11O60813 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.33■□□□□ 0.85
PRAMEF11O60813 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF11O60813 AC008687.6-201ENST00000596318 630 ntBASIC20.33■□□□□ 0.85
PRAMEF11O60813 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 AC120498.8-201ENST00000614275 531 ntBASIC20.33■□□□□ 0.85
PRAMEF11O60813 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEF11O60813 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.33■□□□□ 0.84
PRAMEF11O60813 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PRAMEF11O60813 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF11O60813 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF11O60813 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF11O60813 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF11O60813 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF11O60813 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEF11O60813 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF11O60813 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms