Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GMDSO60547 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
GMDSO60547 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.67■□□□□ 0.42
GMDSO60547 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GMDSO60547 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GMDSO60547 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.66■□□□□ 0.42
GMDSO60547 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GMDSO60547 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.66■□□□□ 0.42
GMDSO60547 AC006015.1-201ENST00000429970 570 ntBASIC17.66■□□□□ 0.42
GMDSO60547 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.66■□□□□ 0.42
GMDSO60547 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GMDSO60547 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.66■□□□□ 0.42
GMDSO60547 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GMDSO60547 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.66■□□□□ 0.42
GMDSO60547 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GMDSO60547 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 AC116050.2-201ENST00000612102 1779 ntBASIC17.66■□□□□ 0.42
GMDSO60547 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GMDSO60547 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.65■□□□□ 0.42
GMDSO60547 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
GMDSO60547 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GMDSO60547 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.65■□□□□ 0.42
GMDSO60547 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.65■□□□□ 0.42
GMDSO60547 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.65■□□□□ 0.42
GMDSO60547 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 AC022517.1-201ENST00000592429 346 ntBASIC17.65■□□□□ 0.42
GMDSO60547 AC010536.3-201ENST00000620306 533 ntBASIC17.65■□□□□ 0.42
GMDSO60547 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GMDSO60547 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.65■□□□□ 0.42
GMDSO60547 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GMDSO60547 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GMDSO60547 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.64■□□□□ 0.42
GMDSO60547 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
GMDSO60547 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.64■□□□□ 0.41
GMDSO60547 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GMDSO60547 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.64■□□□□ 0.41
GMDSO60547 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.64■□□□□ 0.41
GMDSO60547 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.64■□□□□ 0.41
GMDSO60547 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.64■□□□□ 0.41
GMDSO60547 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
GMDSO60547 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GMDSO60547 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.64■□□□□ 0.41
GMDSO60547 AP000974.1-201ENST00000623909 2387 ntBASIC17.64■□□□□ 0.41
GMDSO60547 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
GMDSO60547 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
GMDSO60547 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
GMDSO60547 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.63■□□□□ 0.41
GMDSO60547 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.63■□□□□ 0.41
GMDSO60547 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.63■□□□□ 0.41
GMDSO60547 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GMDSO60547 TERF1P5-201ENST00000477545 1207 ntBASIC17.63■□□□□ 0.41
GMDSO60547 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.63■□□□□ 0.41
GMDSO60547 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.63■□□□□ 0.41
GMDSO60547 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GMDSO60547 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GMDSO60547 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms