Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC28.49■■■□□ 2.15
VGFO15240 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.49■■■□□ 2.15
VGFO15240 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC28.49■■■□□ 2.15
VGFO15240 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
VGFO15240 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC28.49■■■□□ 2.15
VGFO15240 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 PLK5-205ENST00000642079 1969 ntBASIC28.48■■■□□ 2.15
VGFO15240 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.48■■■□□ 2.15
VGFO15240 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
VGFO15240 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC28.48■■■□□ 2.15
VGFO15240 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
VGFO15240 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC28.48■■■□□ 2.15
VGFO15240 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC28.48■■■□□ 2.15
VGFO15240 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC28.48■■■□□ 2.15
VGFO15240 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
VGFO15240 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC28.48■■■□□ 2.15
VGFO15240 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
VGFO15240 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC28.48■■■□□ 2.15
VGFO15240 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
VGFO15240 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
VGFO15240 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
VGFO15240 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
VGFO15240 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC28.47■■■□□ 2.15
VGFO15240 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC28.47■■■□□ 2.15
VGFO15240 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC28.47■■■□□ 2.15
VGFO15240 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC28.47■■■□□ 2.15
VGFO15240 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
VGFO15240 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
VGFO15240 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
VGFO15240 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
VGFO15240 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
VGFO15240 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC28.46■■■□□ 2.15
VGFO15240 FEM1AP4-201ENST00000443167 1987 ntBASIC28.46■■■□□ 2.15
VGFO15240 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC28.46■■■□□ 2.15
VGFO15240 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
VGFO15240 EP400NL-214ENST00000641289 2402 ntBASIC28.46■■■□□ 2.15
VGFO15240 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC28.46■■■□□ 2.15
VGFO15240 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.46■■■□□ 2.15
VGFO15240 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VGFO15240 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
VGFO15240 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC28.46■■■□□ 2.15
VGFO15240 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
VGFO15240 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC28.45■■■□□ 2.15
VGFO15240 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC28.45■■■□□ 2.14
VGFO15240 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VGFO15240 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC28.45■■■□□ 2.14
VGFO15240 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
VGFO15240 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.45■■■□□ 2.14
VGFO15240 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC28.45■■■□□ 2.14
VGFO15240 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
VGFO15240 LINC01568-207ENST00000641790 1380 ntBASIC28.45■■■□□ 2.14
VGFO15240 CYP2D8P-201ENST00000433633 1490 ntBASIC28.45■■■□□ 2.14
VGFO15240 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
VGFO15240 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC28.45■■■□□ 2.14
VGFO15240 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
VGFO15240 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC28.45■■■□□ 2.14
VGFO15240 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC28.45■■■□□ 2.14
VGFO15240 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC28.44■■■□□ 2.14
VGFO15240 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.44■■■□□ 2.14
VGFO15240 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC28.44■■■□□ 2.14
VGFO15240 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.44■■■□□ 2.14
VGFO15240 KRT18P35-201ENST00000510488 1269 ntBASIC28.44■■■□□ 2.14
VGFO15240 NAPSB-206ENST00000562112 1266 ntBASIC28.44■■■□□ 2.14
VGFO15240 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC28.44■■■□□ 2.14
VGFO15240 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.44■■■□□ 2.14
VGFO15240 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.44■■■□□ 2.14
VGFO15240 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC28.44■■■□□ 2.14
VGFO15240 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
VGFO15240 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
VGFO15240 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC28.43■■■□□ 2.14
VGFO15240 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
VGFO15240 AC005521.1-201ENST00000393351 872 ntBASIC28.43■■■□□ 2.14
VGFO15240 AL390955.1-201ENST00000428694 934 ntBASIC28.43■■■□□ 2.14
VGFO15240 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC28.43■■■□□ 2.14
VGFO15240 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC28.43■■■□□ 2.14
VGFO15240 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.43■■■□□ 2.14
VGFO15240 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC28.43■■■□□ 2.14
VGFO15240 AC010947.1-201ENST00000623454 693 ntBASIC28.43■■■□□ 2.14
VGFO15240 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
VGFO15240 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
VGFO15240 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VGFO15240 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VGFO15240 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
VGFO15240 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC28.42■■■□□ 2.14
VGFO15240 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC28.42■■■□□ 2.14
VGFO15240 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
VGFO15240 DUT-205ENST00000558813 769 ntTSL 2 BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms