Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK2O00526 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK2O00526 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.08■□□□□ 0.16
UPK2O00526 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
UPK2O00526 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UPK2O00526 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
UPK2O00526 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
UPK2O00526 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.07■□□□□ 0.16
UPK2O00526 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 AC100791.3-201ENST00000617619 330 ntBASIC16.07■□□□□ 0.16
UPK2O00526 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.07■□□□□ 0.16
UPK2O00526 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK2O00526 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK2O00526 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
UPK2O00526 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
UPK2O00526 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.06■□□□□ 0.16
UPK2O00526 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UPK2O00526 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.06■□□□□ 0.16
UPK2O00526 MCRIP2P1-201ENST00000394346 511 ntBASIC16.06■□□□□ 0.16
UPK2O00526 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.06■□□□□ 0.16
UPK2O00526 RARRES2P4-201ENST00000514074 484 ntBASIC16.06■□□□□ 0.16
UPK2O00526 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 MFSD11-216ENST00000590393 1141 ntBASIC16.06■□□□□ 0.16
UPK2O00526 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.06■□□□□ 0.16
UPK2O00526 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.06■□□□□ 0.16
UPK2O00526 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UPK2O00526 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UPK2O00526 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK2O00526 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
UPK2O00526 AL158211.5-201ENST00000623583 2518 ntBASIC16.05■□□□□ 0.16
UPK2O00526 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK2O00526 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
UPK2O00526 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.05■□□□□ 0.16
UPK2O00526 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 AC016769.1-201ENST00000409132 1010 ntBASIC16.05■□□□□ 0.16
UPK2O00526 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 KRT18P5-201ENST00000436075 1291 ntBASIC16.05■□□□□ 0.16
UPK2O00526 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.05■□□□□ 0.16
UPK2O00526 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.05■□□□□ 0.16
UPK2O00526 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UPK2O00526 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.05■□□□□ 0.16
UPK2O00526 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.05■□□□□ 0.16
UPK2O00526 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UPK2O00526 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.05■□□□□ 0.16
UPK2O00526 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
UPK2O00526 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
UPK2O00526 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK2O00526 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
UPK2O00526 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.04■□□□□ 0.16
UPK2O00526 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UPK2O00526 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UPK2O00526 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.04■□□□□ 0.16
UPK2O00526 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UPK2O00526 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.04■□□□□ 0.16
UPK2O00526 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UPK2O00526 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms