Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 NOC2LP1-202ENST00000452600 2235 ntBASIC16.29■□□□□ 0.2
RNF222A6NCQ9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF222A6NCQ9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF222A6NCQ9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF222A6NCQ9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 AL031848.2-201ENST00000607670 837 ntBASIC16.26■□□□□ 0.19
RNF222A6NCQ9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 AC068880.1-201ENST00000507289 2297 ntBASIC16.26■□□□□ 0.19
RNF222A6NCQ9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF222A6NCQ9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms