Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC098590.1-201ENST00000468126 897 ntBASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC069544.1-201ENST00000609399 999 ntBASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV4-28A0A0C4DH34 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV4-28A0A0C4DH34 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.46□□□□□ -0.1
IGHV4-28A0A0C4DH34 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV4-28A0A0C4DH34 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
IGHV4-28A0A0C4DH34 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 HLA-G-202ENST00000376815 851 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 HLA-G-203ENST00000376818 1127 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AL158047.1-201ENST00000445918 881 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC233263.1-201ENST00000578059 224 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC120498.8-201ENST00000614275 531 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 DPP3P2-201ENST00000416030 1696 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 AC092720.2-201ENST00000602388 1665 ntBASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.45□□□□□ -0.1
IGHV4-28A0A0C4DH34 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IGHV4-28A0A0C4DH34 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms