Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV34A0A0B4J273 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV34A0A0B4J273 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 AC133561.4-201ENST00000566112 224 ntBASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV34A0A0B4J273 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 MIR4466-201ENST00000606121 54 ntBASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV34A0A0B4J273 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV34A0A0B4J273 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV34A0A0B4J273 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms