Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MIR939-201ENST00000401314 82 ntBASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 BX119927.1-201ENST00000636596 1552 ntBASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC091305.1-201ENST00000479476 895 ntBASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AL354811.1-201ENST00000610286 706 ntBASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AL355001.2-201ENST00000620617 1191 ntBASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MIR6084-201ENST00000622012 110 ntBASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KRT8P36-201ENST00000489121 1440 ntBASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SLC7A5P2-201ENST00000553010 536 ntBASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC131212.1-201ENST00000613771 668 ntBASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TREX1-205ENST00000625293 1783 ntBASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms