Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RN7SKP1-201ENST00000365525 307 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RN7SKP85-201ENST00000411349 318 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RPSAP7-201ENST00000456871 885 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RN7SL797P-201ENST00000486314 297 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 LINC01085-203ENST00000511195 326 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC138866.1-201ENST00000514522 497 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 OR5M4P-201ENST00000529436 925 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC068790.1-201ENST00000536166 355 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC233290.1-201ENST00000553021 1186 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RPS7P1-201ENST00000571702 585 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 MIR3135A-201ENST00000578460 77 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 MIR5705-201ENST00000579870 89 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 RPSAP66-201ENST00000592196 606 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AL589765.5-201ENST00000596133 515 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 MRPS17P1-201ENST00000596009 3130 ntBASIC7.73□□□□□ -1.17
LMO3Q8TAP4 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.73□□□□□ -1.17
LMO3Q8TAP4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC020978.6-201ENST00000571197 3177 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AL157698.1-201ENST00000415190 1011 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 RPSAP1-201ENST00000421328 880 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC073900.1-201ENST00000429766 776 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 VDAC2P3-201ENST00000430995 828 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 MYO5BP3-201ENST00000431872 1279 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 HMGN1P6-201ENST00000438508 291 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 SNORA81.1-201ENST00000458922 177 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 PGAM4P2-201ENST00000512491 721 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC078909.2-201ENST00000620584 398 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AC211433.3-201ENST00000623770 375 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 TSHZ2-205ENST00000626626 670 ntBASIC7.72□□□□□ -1.17
LMO3Q8TAP4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LMO3Q8TAP4 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 AL359922.2-201ENST00000581788 3017 ntBASIC7.71□□□□□ -1.17
LMO3Q8TAP4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
LMO3Q8TAP4 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
LMO3Q8TAP4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LMO3Q8TAP4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms