RNA–Protein interactions for RNA: ENST00000528507.1

AP003555.2-201, humanhuman

TSL 3 BASIC

Gene AP003555.2, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.2-201ENST00000528507 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
AP003555.2-201ENST00000528507 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
AP003555.2-201ENST00000528507 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
AP003555.2-201ENST00000528507 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
AP003555.2-201ENST00000528507 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
AP003555.2-201ENST00000528507 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
AP003555.2-201ENST00000528507 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
AP003555.2-201ENST00000528507 KCNA4P22459 653 aa15.61■□□□□ 0.09
AP003555.2-201ENST00000528507 ADRA2BP18089 450 aa15.48■□□□□ 0.07
AP003555.2-201ENST00000528507 ABCC9O60706 1549 aa15.23■□□□□ 0.03
AP003555.2-201ENST00000528507 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
AP003555.2-201ENST00000528507 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
AP003555.2-201ENST00000528507 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
AP003555.2-201ENST00000528507 FOXD1Q16676 465 aa14.92□□□□□ -0.02
AP003555.2-201ENST00000528507 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
AP003555.2-201ENST00000528507 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
AP003555.2-201ENST00000528507 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
AP003555.2-201ENST00000528507 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
AP003555.2-201ENST00000528507 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
AP003555.2-201ENST00000528507 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
AP003555.2-201ENST00000528507 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
AP003555.2-201ENST00000528507 ZBTB22O15209 634 aa14.33□□□□□ -0.12
AP003555.2-201ENST00000528507 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
AP003555.2-201ENST00000528507 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
AP003555.2-201ENST00000528507 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
AP003555.2-201ENST00000528507 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
AP003555.2-201ENST00000528507 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
AP003555.2-201ENST00000528507 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
AP003555.2-201ENST00000528507 NACADO15069 1562 aa14.12□□□□□ -0.15
AP003555.2-201ENST00000528507 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
AP003555.2-201ENST00000528507 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
AP003555.2-201ENST00000528507 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
AP003555.2-201ENST00000528507 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
AP003555.2-201ENST00000528507 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
AP003555.2-201ENST00000528507 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
AP003555.2-201ENST00000528507 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
AP003555.2-201ENST00000528507 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
AP003555.2-201ENST00000528507 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
AP003555.2-201ENST00000528507 FKBP8Q14318 412 aa13.67□□□□□ -0.22
AP003555.2-201ENST00000528507 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
AP003555.2-201ENST00000528507 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
AP003555.2-201ENST00000528507 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
AP003555.2-201ENST00000528507 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
AP003555.2-201ENST00000528507 ATXN8OSP0DMR3 200 aa13.51□□□□□ -0.25
AP003555.2-201ENST00000528507 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
AP003555.2-201ENST00000528507 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
AP003555.2-201ENST00000528507 MSH5O43196 834 aa13.41□□□□□ -0.26
AP003555.2-201ENST00000528507 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
AP003555.2-201ENST00000528507 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
AP003555.2-201ENST00000528507 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
AP003555.2-201ENST00000528507 CUX2O14529 1486 aa13.15□□□□□ -0.3
AP003555.2-201ENST00000528507 ERCC6Q03468 1493 aa13.15□□□□□ -0.3
AP003555.2-201ENST00000528507 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
AP003555.2-201ENST00000528507 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
AP003555.2-201ENST00000528507 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
AP003555.2-201ENST00000528507 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
AP003555.2-201ENST00000528507 NESP48681 1621 aa13.01□□□□□ -0.33
AP003555.2-201ENST00000528507 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
AP003555.2-201ENST00000528507 BCANQ96GW7 911 aa12.99□□□□□ -0.33
AP003555.2-201ENST00000528507 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
AP003555.2-201ENST00000528507 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
AP003555.2-201ENST00000528507 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
AP003555.2-201ENST00000528507 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
AP003555.2-201ENST00000528507 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
AP003555.2-201ENST00000528507 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
AP003555.2-201ENST00000528507 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
AP003555.2-201ENST00000528507 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
AP003555.2-201ENST00000528507 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
AP003555.2-201ENST00000528507 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
AP003555.2-201ENST00000528507 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
AP003555.2-201ENST00000528507 PRKCSHP14314 528 aaPredicted RBP12.85□□□□□ -0.35
AP003555.2-201ENST00000528507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
AP003555.2-201ENST00000528507 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
AP003555.2-201ENST00000528507 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
AP003555.2-201ENST00000528507 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
AP003555.2-201ENST00000528507 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
AP003555.2-201ENST00000528507 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
AP003555.2-201ENST00000528507 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
AP003555.2-201ENST00000528507 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
AP003555.2-201ENST00000528507 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
AP003555.2-201ENST00000528507 WIZO95785 1651 aa12.74□□□□□ -0.37
AP003555.2-201ENST00000528507 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
AP003555.2-201ENST00000528507 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
AP003555.2-201ENST00000528507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
AP003555.2-201ENST00000528507 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
AP003555.2-201ENST00000528507 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
AP003555.2-201ENST00000528507 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
AP003555.2-201ENST00000528507 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
AP003555.2-201ENST00000528507 WDR62O43379 1518 aa12.62□□□□□ -0.39
AP003555.2-201ENST00000528507 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
AP003555.2-201ENST00000528507 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
AP003555.2-201ENST00000528507 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
AP003555.2-201ENST00000528507 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
AP003555.2-201ENST00000528507 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
AP003555.2-201ENST00000528507 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
AP003555.2-201ENST00000528507 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
AP003555.2-201ENST00000528507 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
AP003555.2-201ENST00000528507 FANCD2Q9BXW9 1451 aa12.54□□□□□ -0.4
AP003555.2-201ENST00000528507 PROM2Q8N271 834 aa12.54□□□□□ -0.4
AP003555.2-201ENST00000528507 PKD2Q13563 968 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms