RNA–Protein interactions for RNA: ENST00000455959.7

SEC11A-202, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SEC11A, Length 1,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-202ENST00000455959 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
SEC11A-202ENST00000455959 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
SEC11A-202ENST00000455959 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
SEC11A-202ENST00000455959 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
SEC11A-202ENST00000455959 FOXD1Q16676 465 aa21.98■■□□□ 1.11
SEC11A-202ENST00000455959 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
SEC11A-202ENST00000455959 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
SEC11A-202ENST00000455959 ADRA2BP18089 450 aa20.89■□□□□ 0.93
SEC11A-202ENST00000455959 PIAS4Q8N2W9 510 aaPredicted RBP20.68■□□□□ 0.9
SEC11A-202ENST00000455959 MSH5O43196 834 aa20.4■□□□□ 0.86
SEC11A-202ENST00000455959 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
SEC11A-202ENST00000455959 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
SEC11A-202ENST00000455959 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
SEC11A-202ENST00000455959 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
SEC11A-202ENST00000455959 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
SEC11A-202ENST00000455959 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
SEC11A-202ENST00000455959 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
SEC11A-202ENST00000455959 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
SEC11A-202ENST00000455959 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
SEC11A-202ENST00000455959 KCNA4P22459 653 aa18.31■□□□□ 0.52
SEC11A-202ENST00000455959 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
SEC11A-202ENST00000455959 ABCC9O60706 1549 aa18.25■□□□□ 0.51
SEC11A-202ENST00000455959 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
SEC11A-202ENST00000455959 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
SEC11A-202ENST00000455959 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
SEC11A-202ENST00000455959 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
SEC11A-202ENST00000455959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
SEC11A-202ENST00000455959 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
SEC11A-202ENST00000455959 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
SEC11A-202ENST00000455959 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
SEC11A-202ENST00000455959 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
SEC11A-202ENST00000455959 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
SEC11A-202ENST00000455959 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
SEC11A-202ENST00000455959 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
SEC11A-202ENST00000455959 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
SEC11A-202ENST00000455959 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
SEC11A-202ENST00000455959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
SEC11A-202ENST00000455959 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
SEC11A-202ENST00000455959 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEC11A-202ENST00000455959 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
SEC11A-202ENST00000455959 ZBTB22O15209 634 aa16.81■□□□□ 0.28
SEC11A-202ENST00000455959 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
SEC11A-202ENST00000455959 APLP2Q06481 763 aa16.78■□□□□ 0.28
SEC11A-202ENST00000455959 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
SEC11A-202ENST00000455959 CAPN15O75808 1086 aa16.75■□□□□ 0.27
SEC11A-202ENST00000455959 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
SEC11A-202ENST00000455959 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
SEC11A-202ENST00000455959 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
SEC11A-202ENST00000455959 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
SEC11A-202ENST00000455959 NACADO15069 1562 aa16.56■□□□□ 0.24
SEC11A-202ENST00000455959 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
SEC11A-202ENST00000455959 DSG3P32926 999 aa16.49■□□□□ 0.23
SEC11A-202ENST00000455959 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
SEC11A-202ENST00000455959 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
SEC11A-202ENST00000455959 ABCB7O75027 752 aa16.38■□□□□ 0.21
SEC11A-202ENST00000455959 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
SEC11A-202ENST00000455959 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
SEC11A-202ENST00000455959 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
SEC11A-202ENST00000455959 CUX2O14529 1486 aa16.32■□□□□ 0.2
SEC11A-202ENST00000455959 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
SEC11A-202ENST00000455959 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
SEC11A-202ENST00000455959 POLA2Q14181 598 aa16.25■□□□□ 0.19
SEC11A-202ENST00000455959 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
SEC11A-202ENST00000455959 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
SEC11A-202ENST00000455959 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
SEC11A-202ENST00000455959 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
SEC11A-202ENST00000455959 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
SEC11A-202ENST00000455959 FBLN2P98095 1184 aa15.8■□□□□ 0.12
SEC11A-202ENST00000455959 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
SEC11A-202ENST00000455959 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
SEC11A-202ENST00000455959 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
SEC11A-202ENST00000455959 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
SEC11A-202ENST00000455959 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
SEC11A-202ENST00000455959 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
SEC11A-202ENST00000455959 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
SEC11A-202ENST00000455959 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
SEC11A-202ENST00000455959 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
SEC11A-202ENST00000455959 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
SEC11A-202ENST00000455959 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
SEC11A-202ENST00000455959 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
SEC11A-202ENST00000455959 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
SEC11A-202ENST00000455959 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
SEC11A-202ENST00000455959 NESP48681 1621 aa15.31■□□□□ 0.04
SEC11A-202ENST00000455959 ILDR1Q86SU0 546 aaPredicted RBP15.28■□□□□ 0.04
SEC11A-202ENST00000455959 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
SEC11A-202ENST00000455959 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
SEC11A-202ENST00000455959 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
SEC11A-202ENST00000455959 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
SEC11A-202ENST00000455959 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
SEC11A-202ENST00000455959 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
SEC11A-202ENST00000455959 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
SEC11A-202ENST00000455959 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
SEC11A-202ENST00000455959 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
SEC11A-202ENST00000455959 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
SEC11A-202ENST00000455959 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
SEC11A-202ENST00000455959 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
SEC11A-202ENST00000455959 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
SEC11A-202ENST00000455959 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
SEC11A-202ENST00000455959 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
SEC11A-202ENST00000455959 POTEHQ6S545 545 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms