Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 GTF2IRD1-206ENST00000486086 440 ntTSL 23.42□□□□□ -1.862e-14■■□□□ 11.6
PRPF8Q6P2Q9 CHPT1-206ENST00000550385 754 ntTSL 58.59□□□□□ -1.033e-6■■□□□ 11.6
PRPF8Q6P2Q9 PVT1-209ENST00000520913 584 ntTSL 29.32□□□□□ -0.921e-17■■□□□ 11.6
PRPF8Q6P2Q9 PLCXD1-210ENST00000448477 828 ntTSL 211.95□□□□□ -0.59e-12■■□□□ 11.5
PRPF8Q6P2Q9 EIF3A-202ENST00000462527 1192 ntTSL 25.47□□□□□ -1.535e-9■■□□□ 11.5
PRPF8Q6P2Q9 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61e-10■■□□□ 11.5
PRPF8Q6P2Q9 PRPSAP1-203ENST00000435555 916 ntTSL 58.49□□□□□ -1.051e-10■■□□□ 11.5
PRPF8Q6P2Q9 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC8.17□□□□□ -1.11e-10■■□□□ 11.5
PRPF8Q6P2Q9 DENND4B-203ENST00000462423 783 ntTSL 415.63■□□□□ 0.096e-8■■□□□ 11.5
PRPF8Q6P2Q9 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 214.24□□□□□ -0.137e-8■■□□□ 11.5
PRPF8Q6P2Q9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.24□□□□□ -0.137e-8■■□□□ 11.5
PRPF8Q6P2Q9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.187e-8■■□□□ 11.5
PRPF8Q6P2Q9 NDUFA11-206ENST00000593233 657 ntTSL 313.88□□□□□ -0.197e-8■■□□□ 11.5
PRPF8Q6P2Q9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.1□□□□□ -0.317e-8■■□□□ 11.5
PRPF8Q6P2Q9 AC024592.3-201ENST00000592091 2118 ntTSL 213.03□□□□□ -0.327e-8■■□□□ 11.5
PRPF8Q6P2Q9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.89□□□□□ -0.517e-8■■□□□ 11.5
PRPF8Q6P2Q9 TRIM65-205ENST00000591668 644 ntTSL 210.45□□□□□ -0.743e-15■■□□□ 11.5
PRPF8Q6P2Q9 TRIM65-206ENST00000592642 396 ntTSL 38.11□□□□□ -1.113e-15■■□□□ 11.5
PRPF8Q6P2Q9 GUK1-225ENST00000481341 333 ntTSL 312.71□□□□□ -0.373e-7■■□□□ 11.5
PRPF8Q6P2Q9 GSTP1-204ENST00000489040 523 ntTSL 212.08□□□□□ -0.485e-7■■□□□ 11.5
PRPF8Q6P2Q9 CDKN1A-206ENST00000462537 553 ntTSL 315.63■□□□□ 0.092e-9■■□□□ 11.5
PRPF8Q6P2Q9 CDKN1A-207ENST00000478800 616 ntTSL 214.27□□□□□ -0.132e-9■■□□□ 11.5
PRPF8Q6P2Q9 TBL2-207ENST00000435792 1109 ntTSL 322.71■■□□□ 1.234e-7■■□□□ 11.5
PRPF8Q6P2Q9 TBL2-211ENST00000452475 1262 ntTSL 322.2■■□□□ 1.144e-7■■□□□ 11.5
PRPF8Q6P2Q9 TBL2-208ENST00000437521 834 ntTSL 318.22■□□□□ 0.514e-7■■□□□ 11.5
PRPF8Q6P2Q9 CD53-203ENST00000471220 657 ntTSL 26.92□□□□□ -1.34e-7■■□□□ 11.5
PRPF8Q6P2Q9 CCDC88B-208ENST00000492980 2118 ntTSL 516.26■□□□□ 0.193e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.153e-6■■□□□ 11.5
PRPF8Q6P2Q9 PLCD1-207ENST00000484829 1044 ntTSL 515.83■□□□□ 0.122e-8■■□□□ 11.5
PRPF8Q6P2Q9 CCDC88B-204ENST00000463837 5235 ntTSL 214.92□□□□□ -0.023e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCDC88B-209ENST00000494080 4563 ntTSL 213.86□□□□□ -0.193e-6■■□□□ 11.5
PRPF8Q6P2Q9 CCDC88B-210ENST00000494566 2909 ntTSL 212.91□□□□□ -0.343e-6■■□□□ 11.5
PRPF8Q6P2Q9 TAX1BP1-210ENST00000488564 4020 ntTSL 57.83□□□□□ -1.164e-9■■□□□ 11.5
PRPF8Q6P2Q9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.78□□□□□ -0.362e-6■■□□□ 11.5
PRPF8Q6P2Q9 PKD1-209ENST00000472659 661 ntTSL 315.85■□□□□ 0.137e-8■■□□□ 11.5
PRPF8Q6P2Q9 HES4-203ENST00000481869 1038 ntTSL 223.68■■□□□ 1.382e-8■■□□□ 11.5
PRPF8Q6P2Q9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.23■□□□□ 0.992e-8■■□□□ 11.5
PRPF8Q6P2Q9 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.65■□□□□ 0.92e-8■■□□□ 11.5
PRPF8Q6P2Q9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.692e-8■■□□□ 11.5
PRPF8Q6P2Q9 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.014e-14■■□□□ 11.5
PRPF8Q6P2Q9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.49□□□□□ -1.534e-14■■□□□ 11.5
PRPF8Q6P2Q9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.02■□□□□ 0.155e-11■■□□□ 11.5
PRPF8Q6P2Q9 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.885e-11■■□□□ 11.5
PRPF8Q6P2Q9 ASNS-213ENST00000454046 1947 ntTSL 57.04□□□□□ -1.285e-11■■□□□ 11.5
PRPF8Q6P2Q9 SLC7A6-207ENST00000563208 572 ntTSL 58.75□□□□□ -1.012e-6■■□□□ 11.5
PRPF8Q6P2Q9 SLC7A6-204ENST00000562863 419 ntTSL 58.49□□□□□ -1.052e-6■■□□□ 11.5
PRPF8Q6P2Q9 SSR2-217ENST00000531917 555 ntTSL 512.68□□□□□ -0.387e-7■■□□□ 11.5
PRPF8Q6P2Q9 SSR2-212ENST00000488179 1712 ntTSL 57.24□□□□□ -1.257e-7■■□□□ 11.5
PRPF8Q6P2Q9 TSPAN4-212ENST00000494815 2187 ntTSL 214.59□□□□□ -0.075e-9■■□□□ 11.5
PRPF8Q6P2Q9 RBM6-217ENST00000483350 988 ntTSL 311.95□□□□□ -0.53e-6■■□□□ 11.5
PRPF8Q6P2Q9 SLC38A3-208ENST00000621456 635 ntTSL 515.23■□□□□ 0.038e-9■■□□□ 11.5
PRPF8Q6P2Q9 SLC38A3-207ENST00000620404 566 ntTSL 311.99□□□□□ -0.498e-9■■□□□ 11.5
PRPF8Q6P2Q9 C16orf58-203ENST00000541442 1056 ntTSL 218.22■□□□□ 0.514e-7■■□□□ 11.5
PRPF8Q6P2Q9 RNF126-206ENST00000592626 652 ntTSL 216.35■□□□□ 0.216e-10■■□□□ 11.5
PRPF8Q6P2Q9 DHPS-216ENST00000599481 476 ntTSL 39.3□□□□□ -0.921e-6■■□□□ 11.5
PRPF8Q6P2Q9 ANKRD10-208ENST00000485844 641 ntTSL 26.58□□□□□ -1.364e-20■■□□□ 11.5
PRPF8Q6P2Q9 ANKRD10-211ENST00000603993 704 ntTSL 26.08□□□□□ -1.444e-20■■□□□ 11.5
PRPF8Q6P2Q9 ANKRD10-207ENST00000475809 446 ntTSL 21.6□□□□□ -2.154e-20■■□□□ 11.5
PRPF8Q6P2Q9 PLCXD1-208ENST00000445062 555 ntTSL 418.78■□□□□ 0.69e-12■■□□□ 11.5
PRPF8Q6P2Q9 STARD10-217ENST00000543089 506 ntTSL 1 (best)14.51□□□□□ -0.093e-7■■□□□ 11.5
PRPF8Q6P2Q9 FUK-212ENST00000576107 756 ntTSL 39.25□□□□□ -0.933e-8■■□□□ 11.5
PRPF8Q6P2Q9 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.181e-6■■□□□ 11.5
PRPF8Q6P2Q9 FAM193A-209ENST00000513898 4202 ntTSL 1 (best)7.65□□□□□ -1.181e-6■■□□□ 11.5
PRPF8Q6P2Q9 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.241e-6■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.29□□□□□ -0.121e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.121e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.241e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-203ENST00000343898 1720 ntTSL 1 (best)13.23□□□□□ -0.291e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.311e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.561e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC11.24□□□□□ -0.611e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.631e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.731e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.741e-7■■□□□ 11.5
PRPF8Q6P2Q9 IL18BP-213ENST00000534583 1201 ntTSL 510.04□□□□□ -0.81e-7■■□□□ 11.5
PRPF8Q6P2Q9 SGSH-212ENST00000575188 553 ntTSL 315.35■□□□□ 0.054e-12■■□□□ 11.5
PRPF8Q6P2Q9 TMEM184A-203ENST00000319018 4374 ntTSL 512.55□□□□□ -0.42e-6■■□□□ 11.5
PRPF8Q6P2Q9 TMEM184A-210ENST00000468535 2843 ntTSL 212.49□□□□□ -0.412e-6■■□□□ 11.5
PRPF8Q6P2Q9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.442e-6■■□□□ 11.5
PRPF8Q6P2Q9 SLC12A4-213ENST00000573702 633 ntTSL 412.18□□□□□ -0.463e-13■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.77□□□□□ -0.684e-7■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC10.44□□□□□ -0.744e-7■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC10.1□□□□□ -0.794e-7■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.854e-7■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-204ENST00000445503 4158 ntTSL 1 (best)9.53□□□□□ -0.884e-7■■□□□ 11.5
PRPF8Q6P2Q9 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.03□□□□□ -1.284e-7■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-209ENST00000554930 1377 ntTSL 511.3□□□□□ -0.62e-6■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.162e-6■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.18□□□□□ -1.262e-6■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.592e-6■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-210ENST00000555870 7434 ntTSL 1 (best)4.94□□□□□ -1.622e-6■■□□□ 11.5
PRPF8Q6P2Q9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.6□□□□□ -1.832e-6■■□□□ 11.5
PRPF8Q6P2Q9 PSMD5-207ENST00000496688 384 ntTSL 37.45□□□□□ -1.223e-8■■□□□ 11.5
PRPF8Q6P2Q9 TTLL3-231ENST00000496246 507 ntTSL 49.57□□□□□ -0.883e-7■■□□□ 11.5
PRPF8Q6P2Q9 TTLL3-201ENST00000310252 1561 ntAPPRIS ALT2 TSL 1 (best)9.28□□□□□ -0.923e-7■■□□□ 11.5
PRPF8Q6P2Q9 TTLL3-226ENST00000474948 603 ntTSL 48.22□□□□□ -1.093e-7■■□□□ 11.5
PRPF8Q6P2Q9 TTLL3-220ENST00000452823 579 ntTSL 37.36□□□□□ -1.233e-7■■□□□ 11.5
PRPF8Q6P2Q9 ECHDC2-212ENST00000486170 474 ntTSL 217.08■□□□□ 0.329e-8■■□□□ 11.5
PRPF8Q6P2Q9 ECHDC2-220ENST00000498544 985 ntTSL 214.82□□□□□ -0.049e-8■■□□□ 11.5
PRPF8Q6P2Q9 ECHDC2-209ENST00000479183 2356 ntTSL 211.58□□□□□ -0.569e-8■■□□□ 11.5
Retrieved 100 of 73,762 protein–RNA pairs in 986.2 ms