RNA–Protein interactions for RNA: ENST00000513898.5

FAM193A-209, Transcript of family with sequence similarity 193 member A, humanhuman

TSL 1 (best)

Gene FAM193A, Length 4,202 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM193A-209ENST00000513898 NISCHQ9Y2I1 1504 aa16.22■□□□□ 0.19
FAM193A-209ENST00000513898 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
FAM193A-209ENST00000513898 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
FAM193A-209ENST00000513898 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
FAM193A-209ENST00000513898 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
FAM193A-209ENST00000513898 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
FAM193A-209ENST00000513898 FAM9AQ8IZU1 332 aaPredicted RBP14.37□□□□□ -0.11
FAM193A-209ENST00000513898 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
FAM193A-209ENST00000513898 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
FAM193A-209ENST00000513898 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
FAM193A-209ENST00000513898 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
FAM193A-209ENST00000513898 PPARGC1BQ86YN6 1023 aaKnown RBP13.91□□□□□ -0.18
FAM193A-209ENST00000513898 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
FAM193A-209ENST00000513898 HRCP23327 699 aa13.85□□□□□ -0.19
FAM193A-209ENST00000513898 APLP2Q06481 763 aa13.81□□□□□ -0.2
FAM193A-209ENST00000513898 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
FAM193A-209ENST00000513898 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
FAM193A-209ENST00000513898 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
FAM193A-209ENST00000513898 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
FAM193A-209ENST00000513898 ABCC9O60706 1549 aa13.55□□□□□ -0.24
FAM193A-209ENST00000513898 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
FAM193A-209ENST00000513898 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
FAM193A-209ENST00000513898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
FAM193A-209ENST00000513898 CENPBP07199 599 aaPredicted RBP13.45□□□□□ -0.26
FAM193A-209ENST00000513898 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
FAM193A-209ENST00000513898 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
FAM193A-209ENST00000513898 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
FAM193A-209ENST00000513898 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
FAM193A-209ENST00000513898 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
FAM193A-209ENST00000513898 ITGAEP38570 1179 aa13.31□□□□□ -0.28
FAM193A-209ENST00000513898 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
FAM193A-209ENST00000513898 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
FAM193A-209ENST00000513898 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.3
FAM193A-209ENST00000513898 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
FAM193A-209ENST00000513898 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
FAM193A-209ENST00000513898 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
FAM193A-209ENST00000513898 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
FAM193A-209ENST00000513898 MYT1Q01538 1121 aa12.99□□□□□ -0.33
FAM193A-209ENST00000513898 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
FAM193A-209ENST00000513898 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.34
FAM193A-209ENST00000513898 NEFLP07196 543 aa12.94□□□□□ -0.34
FAM193A-209ENST00000513898 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
FAM193A-209ENST00000513898 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
FAM193A-209ENST00000513898 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
FAM193A-209ENST00000513898 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
FAM193A-209ENST00000513898 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
FAM193A-209ENST00000513898 CECR2Q9BXF3 1484 aa12.87□□□□□ -0.35
FAM193A-209ENST00000513898 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
FAM193A-209ENST00000513898 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
FAM193A-209ENST00000513898 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
FAM193A-209ENST00000513898 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
FAM193A-209ENST00000513898 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
FAM193A-209ENST00000513898 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
FAM193A-209ENST00000513898 BCANQ96GW7 911 aa12.74□□□□□ -0.37
FAM193A-209ENST00000513898 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
FAM193A-209ENST00000513898 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
FAM193A-209ENST00000513898 NACADO15069 1562 aa12.69□□□□□ -0.38
FAM193A-209ENST00000513898 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
FAM193A-209ENST00000513898 CLIP1P30622 1438 aa12.68□□□□□ -0.38
FAM193A-209ENST00000513898 MIER1Q8N108 512 aa12.66□□□□□ -0.38
FAM193A-209ENST00000513898 SOGA1O94964 1423 aa12.64□□□□□ -0.39
FAM193A-209ENST00000513898 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
FAM193A-209ENST00000513898 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
FAM193A-209ENST00000513898 TNIKQ9UKE5 1360 aa12.61□□□□□ -0.39
FAM193A-209ENST00000513898 ANP32CO43423 234 aa12.61□□□□□ -0.39
FAM193A-209ENST00000513898 FBLN2P98095 1184 aa12.61□□□□□ -0.39
FAM193A-209ENST00000513898 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
FAM193A-209ENST00000513898 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
FAM193A-209ENST00000513898 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
FAM193A-209ENST00000513898 GOLGA3Q08378 1498 aa12.58□□□□□ -0.39
FAM193A-209ENST00000513898 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
FAM193A-209ENST00000513898 EEA1Q15075 1411 aa12.56□□□□□ -0.4
FAM193A-209ENST00000513898 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
FAM193A-209ENST00000513898 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
FAM193A-209ENST00000513898 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
FAM193A-209ENST00000513898 CHIC2Q9UKJ5 165 aa12.51□□□□□ -0.41
FAM193A-209ENST00000513898 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
FAM193A-209ENST00000513898 WIZO95785 1651 aa12.5□□□□□ -0.41
FAM193A-209ENST00000513898 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
FAM193A-209ENST00000513898 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
FAM193A-209ENST00000513898 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
FAM193A-209ENST00000513898 TONSLQ96HA7 1378 aa12.46□□□□□ -0.42
FAM193A-209ENST00000513898 FKBP8Q14318 412 aa12.45□□□□□ -0.42
FAM193A-209ENST00000513898 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
FAM193A-209ENST00000513898 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
FAM193A-209ENST00000513898 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
FAM193A-209ENST00000513898 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
FAM193A-209ENST00000513898 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
FAM193A-209ENST00000513898 HNRNPUQ00839 825 aaKnown RBP eCLIP12.39□□□□□ -0.43
FAM193A-209ENST00000513898 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
FAM193A-209ENST00000513898 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
FAM193A-209ENST00000513898 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
FAM193A-209ENST00000513898 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
FAM193A-209ENST00000513898 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
FAM193A-209ENST00000513898 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
FAM193A-209ENST00000513898 IRX6P78412 446 aaPredicted RBP12.3□□□□□ -0.44
FAM193A-209ENST00000513898 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
FAM193A-209ENST00000513898 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
FAM193A-209ENST00000513898 CUX2O14529 1486 aa12.27□□□□□ -0.45
FAM193A-209ENST00000513898 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms