Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 U3.14-201ENST00000365363 227 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 RPL34P19-201ENST00000415903 342 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 AL161931.1-201ENST00000612768 246 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 FGL2-202ENST00000637771 989 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.68□□□□□ -1.34
FREM3P0C091 RPL5P4-201ENST00000434805 886 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.68□□□□□ -1.34
FREM3P0C091 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC061975.3-201ENST00000583209 244 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC024451.4-201ENST00000602578 752 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 HYDIN2-203ENST00000614586 13885 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.68□□□□□ -1.34
FREM3P0C091 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.68□□□□□ -1.34
FREM3P0C091 AC006116.1-201ENST00000587908 2171 ntBASIC6.68□□□□□ -1.34
FREM3P0C091 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.68□□□□□ -1.34
FREM3P0C091 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
FREM3P0C091 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FREM3P0C091 AL133320.1-201ENST00000621423 2352 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FREM3P0C091 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
FREM3P0C091 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FREM3P0C091 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
FREM3P0C091 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.67□□□□□ -1.34
FREM3P0C091 RN7SKP85-201ENST00000411349 318 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.67□□□□□ -1.34
FREM3P0C091 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.67□□□□□ -1.34
FREM3P0C091 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.67□□□□□ -1.34
FREM3P0C091 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 AC090680.1-201ENST00000464696 860 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC6.67□□□□□ -1.34
FREM3P0C091 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.67□□□□□ -1.34
FREM3P0C091 SAA3P-201ENST00000533267 365 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 AC233290.1-201ENST00000553021 1186 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 AC105275.2-201ENST00000567907 711 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.67□□□□□ -1.34
FREM3P0C091 RN7SL657P-201ENST00000582431 293 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.67□□□□□ -1.34
FREM3P0C091 AL589765.5-201ENST00000596133 515 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 CUX2P1-201ENST00000606426 298 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 IPO7P2-201ENST00000451446 1750 ntBASIC6.67□□□□□ -1.34
FREM3P0C091 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.67□□□□□ -1.34
FREM3P0C091 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 EML5-201ENST00000380664 5910 ntTSL 5 BASIC6.67□□□□□ -1.34
FREM3P0C091 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FREM3P0C091 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms