Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
COL15A1P39059 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.35□□□□□ -0.91
COL15A1P39059 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC9.35□□□□□ -0.91
COL15A1P39059 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 AC245505.2-201ENST00000553572 3055 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 RPL24P4-201ENST00000326586 421 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 MIR575-201ENST00000385013 94 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 AC099535.1-201ENST00000408928 371 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 GAPDHP34-201ENST00000432112 823 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC9.35□□□□□ -0.91
COL15A1P39059 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC9.35□□□□□ -0.91
COL15A1P39059 PTMAP1-205ENST00000455552 325 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 AC090680.1-201ENST00000464696 860 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 RNA5SP287-201ENST00000516358 103 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC9.35□□□□□ -0.91
COL15A1P39059 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC9.35□□□□□ -0.91
COL15A1P39059 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 AL590396.3-201ENST00000636334 300 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 AC090774.4-201ENST00000578888 1372 ntBASIC9.35□□□□□ -0.91
COL15A1P39059 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC9.35□□□□□ -0.91
COL15A1P39059 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
COL15A1P39059 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
COL15A1P39059 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 TNFSF15-201ENST00000374044 2789 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 AL049776.1-201ENST00000624600 2025 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 AP001527.1-201ENST00000566440 1957 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 AC009220.2-201ENST00000489759 1751 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
COL15A1P39059 TRIM53CP-201ENST00000531490 1354 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
COL15A1P39059 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 PDCL3P5-201ENST00000398028 722 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 AC064862.5-201ENST00000440618 334 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 AL845321.1-201ENST00000444603 348 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 RHEBP1-201ENST00000448647 556 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 OR7E7P-201ENST00000455678 1012 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC9.34□□□□□ -0.91
COL15A1P39059 GLYATL1P4-201ENST00000529326 906 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 AC068408.1-201ENST00000577406 1144 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 AC138207.8-204ENST00000579588 527 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC9.34□□□□□ -0.91
COL15A1P39059 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
COL15A1P39059 AC211433.3-201ENST00000623770 375 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 AC022743.1-201ENST00000624990 664 ntBASIC9.34□□□□□ -0.91
COL15A1P39059 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC9.34□□□□□ -0.91
COL15A1P39059 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
COL15A1P39059 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
COL15A1P39059 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
COL15A1P39059 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 MFSD8-256ENST00000641949 1640 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 MRPS17P1-201ENST00000596009 3130 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 AC069222.1-201ENST00000608028 3360 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC9.33□□□□□ -0.92
COL15A1P39059 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 OR2A3P-202ENST00000641249 1776 ntBASIC9.33□□□□□ -0.92
COL15A1P39059 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
COL15A1P39059 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
COL15A1P39059 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms