Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 AC108673.1-201ENST00000510422 1159 ntBASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01558Q9Y6Z2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PCDHA12-202ENST00000613593 2588 ntBASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms