Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCA3PQ9Y6N3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CLCA3PQ9Y6N3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCA3PQ9Y6N3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCA3PQ9Y6N3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCA3PQ9Y6N3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 KRT18P6-201ENST00000555540 1265 ntBASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 AC083880.1-201ENST00000608266 535 ntBASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCA3PQ9Y6N3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCA3PQ9Y6N3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCA3PQ9Y6N3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLCA3PQ9Y6N3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 RNA5SP413-201ENST00000516373 109 ntBASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 CD99P1-205ENST00000527459 561 ntBASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCA3PQ9Y6N3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms