Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G3Q9Y6M4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 MIR4785-201ENST00000585005 73 ntBASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CSNK1G3Q9Y6M4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 TSPY7P-201ENST00000431358 1114 ntBASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1G3Q9Y6M4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 BX088651.1-201ENST00000540551 451 ntBASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 AC113410.3-201ENST00000623366 203 ntBASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1G3Q9Y6M4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK1G3Q9Y6M4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.64■□□□□ 0.74
CSNK1G3Q9Y6M4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK1G3Q9Y6M4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CSNK1G3Q9Y6M4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK1G3Q9Y6M4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK1G3Q9Y6M4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1G3Q9Y6M4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms