Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS1Q9Y6A9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 CA15P2-201ENST00000611168 834 ntBASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SPCS1Q9Y6A9 AC046158.3-201ENST00000624947 2558 ntBASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.78□□□□□ -0.2
SPCS1Q9Y6A9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS1Q9Y6A9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.77□□□□□ -0.2
SPCS1Q9Y6A9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS1Q9Y6A9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SPCS1Q9Y6A9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPCS1Q9Y6A9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms