Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 AC068338.2-201ENST00000563278 1430 ntBASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 SLC7A5P1-201ENST00000568957 537 ntBASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 AC013268.1-206ENST00000638368 961 ntBASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 AC112229.1-201ENST00000639295 961 ntBASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RABGEF1Q9UJ41 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RABGEF1Q9UJ41 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 CYP2T1P-201ENST00000432607 1285 ntBASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 AC069152.1-201ENST00000438030 544 ntBASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RABGEF1Q9UJ41 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 MIR4651-201ENST00000582622 73 ntBASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 AC116562.4-201ENST00000641316 2276 ntBASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RABGEF1Q9UJ41 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RABGEF1Q9UJ41 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 AL158211.5-201ENST00000623583 2518 ntBASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RABGEF1Q9UJ41 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms