Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 AC123595.1-201ENST00000440769 1046 ntBASIC19.82■□□□□ 0.76
MKS1Q9NXB0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MKS1Q9NXB0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 AC004408.2-201ENST00000623613 2777 ntBASIC19.81■□□□□ 0.76
MKS1Q9NXB0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MKS1Q9NXB0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MKS1Q9NXB0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.79■□□□□ 0.76
MKS1Q9NXB0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 CYP21A1P-202ENST00000354927 1481 ntBASIC19.79■□□□□ 0.76
MKS1Q9NXB0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.79■□□□□ 0.76
MKS1Q9NXB0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms