Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 LETM1P2-201ENST00000597330 2178 ntBASIC20.98■□□□□ 0.95
CD248Q9HCU0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.98■□□□□ 0.95
CD248Q9HCU0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.98■□□□□ 0.95
CD248Q9HCU0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 AC026366.1-201ENST00000488803 879 ntBASIC20.98■□□□□ 0.95
CD248Q9HCU0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 AC006058.3-201ENST00000606217 1069 ntBASIC20.98■□□□□ 0.95
CD248Q9HCU0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD248Q9HCU0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.98■□□□□ 0.95
CD248Q9HCU0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 CDV3P1-201ENST00000471403 739 ntBASIC20.97■□□□□ 0.95
CD248Q9HCU0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
CD248Q9HCU0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD248Q9HCU0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 AC008403.3-201ENST00000598924 454 ntBASIC20.96■□□□□ 0.95
CD248Q9HCU0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD248Q9HCU0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD248Q9HCU0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.95■□□□□ 0.94
CD248Q9HCU0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD248Q9HCU0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms