Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 AC126544.1-201ENST00000580842 1059 ntBASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 AC005224.4-201ENST00000583262 1652 ntBASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 AC125437.2-201ENST00000625180 2167 ntBASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SND1-IT1Q9HBX3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 AC233992.3-201ENST00000607491 485 ntBASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SND1-IT1Q9HBX3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 IGHV3-19-201ENST00000521488 291 ntBASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 MIR4767-201ENST00000582827 78 ntBASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 AP004607.4-201ENST00000530158 1459 ntBASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SND1-IT1Q9HBX3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SND1-IT1Q9HBX3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.4□□□□□ -0.27
SND1-IT1Q9HBX3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SND1-IT1Q9HBX3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms