Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 AC093484.2-201ENST00000580996 2166 ntBASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 AC055733.4-201ENST00000638462 1354 ntBASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 AP005435.1-201ENST00000529293 1178 ntBASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 AC093503.3-201ENST00000624917 2352 ntBASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
MAP1LC3AQ9H492 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
MAP1LC3AQ9H492 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
MAP1LC3AQ9H492 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms