Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
PTPN23Q9H3S7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PTPN23Q9H3S7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC30.44■■■□□ 2.46
PTPN23Q9H3S7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PTPN23Q9H3S7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PTPN23Q9H3S7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC30.42■■■□□ 2.46
PTPN23Q9H3S7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 AC073912.3-201ENST00000624414 853 ntBASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PTPN23Q9H3S7 KRT8P17-201ENST00000453110 1448 ntBASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 HLA-G-202ENST00000376815 851 ntBASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 HLA-G-203ENST00000376818 1127 ntBASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
PTPN23Q9H3S7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PTPN23Q9H3S7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 BX088651.1-201ENST00000540551 451 ntBASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
PTPN23Q9H3S7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.37■■■□□ 2.45
PTPN23Q9H3S7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms