Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.11■□□□□ 0.65
VCX3BQ9H321 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.1■□□□□ 0.65
VCX3BQ9H321 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 AC137630.3-201ENST00000607245 391 ntBASIC19.1■□□□□ 0.65
VCX3BQ9H321 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.1■□□□□ 0.65
VCX3BQ9H321 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VCX3BQ9H321 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3BQ9H321 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 AC241377.3-202ENST00000626088 1088 ntBASIC19.09■□□□□ 0.65
VCX3BQ9H321 AC241585.3-202ENST00000628937 1088 ntBASIC19.09■□□□□ 0.65
VCX3BQ9H321 AC245100.8-202ENST00000629247 1058 ntBASIC19.09■□□□□ 0.65
VCX3BQ9H321 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.09■□□□□ 0.65
VCX3BQ9H321 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3BQ9H321 TREX1-205ENST00000625293 1783 ntBASIC19.09■□□□□ 0.65
VCX3BQ9H321 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VCX3BQ9H321 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.08■□□□□ 0.65
VCX3BQ9H321 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.08■□□□□ 0.65
VCX3BQ9H321 AL049812.1-201ENST00000432563 2267 ntBASIC19.08■□□□□ 0.65
VCX3BQ9H321 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VCX3BQ9H321 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VCX3BQ9H321 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3BQ9H321 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VCX3BQ9H321 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VCX3BQ9H321 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.08■□□□□ 0.64
VCX3BQ9H321 BX005040.4-201ENST00000637145 1518 ntBASIC19.08■□□□□ 0.64
VCX3BQ9H321 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.08■□□□□ 0.64
VCX3BQ9H321 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.08■□□□□ 0.64
VCX3BQ9H321 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 LINC01465-201ENST00000408887 1940 ntBASIC19.08■□□□□ 0.64
VCX3BQ9H321 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3BQ9H321 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.07■□□□□ 0.64
VCX3BQ9H321 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms