Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 AC093484.2-201ENST00000580996 2166 ntBASIC18.36■□□□□ 0.53
COPS4Q9BT78 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS4Q9BT78 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS4Q9BT78 MIR6084-201ENST00000622012 110 ntBASIC18.36■□□□□ 0.53
COPS4Q9BT78 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS4Q9BT78 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPS4Q9BT78 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 AC005837.3-201ENST00000612163 286 ntBASIC18.35■□□□□ 0.53
COPS4Q9BT78 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS4Q9BT78 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.35■□□□□ 0.53
COPS4Q9BT78 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 TMEM179-206ENST00000616017 1645 ntBASIC18.34■□□□□ 0.53
COPS4Q9BT78 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COPS4Q9BT78 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPS4Q9BT78 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.33■□□□□ 0.53
COPS4Q9BT78 AP004607.4-201ENST00000530158 1459 ntBASIC18.33■□□□□ 0.53
COPS4Q9BT78 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS4Q9BT78 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
COPS4Q9BT78 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
COPS4Q9BT78 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COPS4Q9BT78 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.33■□□□□ 0.53
COPS4Q9BT78 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS4Q9BT78 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.33■□□□□ 0.53
COPS4Q9BT78 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS4Q9BT78 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COPS4Q9BT78 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COPS4Q9BT78 AC105265.2-201ENST00000467189 838 ntBASIC18.33■□□□□ 0.52
COPS4Q9BT78 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.33■□□□□ 0.52
COPS4Q9BT78 TPRG1LP1-201ENST00000598702 760 ntBASIC18.33■□□□□ 0.52
COPS4Q9BT78 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.33■□□□□ 0.52
COPS4Q9BT78 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COPS4Q9BT78 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.33■□□□□ 0.52
COPS4Q9BT78 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COPS4Q9BT78 AIRN-201ENST00000601203 4374 ntBASIC18.33■□□□□ 0.52
COPS4Q9BT78 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COPS4Q9BT78 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.32■□□□□ 0.52
COPS4Q9BT78 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COPS4Q9BT78 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COPS4Q9BT78 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COPS4Q9BT78 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms