Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 AC060766.5-201ENST00000590539 871 ntBASIC16.71■□□□□ 0.27
GAFA1Q96PS6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAFA1Q96PS6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GAFA1Q96PS6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
GAFA1Q96PS6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 AC099778.1-201ENST00000568593 1911 ntBASIC16.7■□□□□ 0.26
GAFA1Q96PS6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 AC092368.3-202ENST00000574180 1591 ntBASIC16.7■□□□□ 0.26
GAFA1Q96PS6 BX119927.1-201ENST00000636596 1552 ntBASIC16.7■□□□□ 0.26
GAFA1Q96PS6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAFA1Q96PS6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AL391422.3-201ENST00000603791 2761 ntBASIC16.69■□□□□ 0.26
GAFA1Q96PS6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 PNMA6B-201ENST00000538162 1200 ntBASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AC005829.2-201ENST00000571422 1056 ntBASIC16.69■□□□□ 0.26
GAFA1Q96PS6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.69■□□□□ 0.26
GAFA1Q96PS6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 AL390719.1-204ENST00000412397 1219 ntBASIC16.68■□□□□ 0.26
GAFA1Q96PS6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAFA1Q96PS6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms