Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
ZNF560Q96MR9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF560Q96MR9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF560Q96MR9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ZNF560Q96MR9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.48■■□□□ 1.03
ZNF560Q96MR9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 AC098590.1-201ENST00000468126 897 ntBASIC21.47■■□□□ 1.03
ZNF560Q96MR9 RPS2P52-201ENST00000469610 820 ntBASIC21.47■■□□□ 1.03
ZNF560Q96MR9 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 AC233263.1-201ENST00000578059 224 ntBASIC21.47■■□□□ 1.03
ZNF560Q96MR9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF560Q96MR9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF560Q96MR9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 AC020907.5-201ENST00000624372 1936 ntBASIC21.45■■□□□ 1.02
ZNF560Q96MR9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 GCSHP5-201ENST00000443090 522 ntBASIC21.45■■□□□ 1.02
ZNF560Q96MR9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF560Q96MR9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 RN7SL471P-201ENST00000580476 299 ntBASIC21.44■■□□□ 1.02
ZNF560Q96MR9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 AL121906.2-201ENST00000621597 723 ntBASIC21.44■■□□□ 1.02
ZNF560Q96MR9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 KRT16P6-202ENST00000425692 1426 ntBASIC21.44■■□□□ 1.02
ZNF560Q96MR9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF560Q96MR9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 AC142381.4-202ENST00000563973 229 ntBASIC21.43■■□□□ 1.02
ZNF560Q96MR9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 SMG8-203ENST00000578922 2178 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms