Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.2■□□□□ 0.98
CALR3Q96L12 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.2■□□□□ 0.98
CALR3Q96L12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CALR3Q96L12 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CALR3Q96L12 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CALR3Q96L12 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CALR3Q96L12 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CALR3Q96L12 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.2■□□□□ 0.98
CALR3Q96L12 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.2■□□□□ 0.98
CALR3Q96L12 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.2■□□□□ 0.98
CALR3Q96L12 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CALR3Q96L12 CYP21A1P-202ENST00000354927 1481 ntBASIC21.2■□□□□ 0.98
CALR3Q96L12 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CALR3Q96L12 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CALR3Q96L12 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CALR3Q96L12 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.19■□□□□ 0.98
CALR3Q96L12 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CALR3Q96L12 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.19■□□□□ 0.98
CALR3Q96L12 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 AC100791.3-201ENST00000617619 330 ntBASIC21.19■□□□□ 0.98
CALR3Q96L12 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CALR3Q96L12 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CALR3Q96L12 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.19■□□□□ 0.98
CALR3Q96L12 AC009237.14-201ENST00000609975 1594 ntBASIC21.19■□□□□ 0.98
CALR3Q96L12 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.19■□□□□ 0.98
CALR3Q96L12 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.18■□□□□ 0.98
CALR3Q96L12 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CALR3Q96L12 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.18■□□□□ 0.98
CALR3Q96L12 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.18■□□□□ 0.98
CALR3Q96L12 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.18■□□□□ 0.98
CALR3Q96L12 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CALR3Q96L12 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.18■□□□□ 0.98
CALR3Q96L12 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.18■□□□□ 0.98
CALR3Q96L12 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
CALR3Q96L12 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
CALR3Q96L12 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 KRT18P11-201ENST00000435214 1283 ntBASIC21.17■□□□□ 0.98
CALR3Q96L12 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.17■□□□□ 0.98
CALR3Q96L12 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 AC010536.3-201ENST00000620306 533 ntBASIC21.17■□□□□ 0.98
CALR3Q96L12 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CALR3Q96L12 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CALR3Q96L12 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CALR3Q96L12 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.16■□□□□ 0.98
CALR3Q96L12 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.16■□□□□ 0.98
CALR3Q96L12 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CALR3Q96L12 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CALR3Q96L12 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
CALR3Q96L12 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
CALR3Q96L12 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms