Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
USP7Q93009 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.79■□□□□ 0.76
USP7Q93009 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 RPS2P4-201ENST00000476944 856 ntBASIC19.79■□□□□ 0.76
USP7Q93009 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.79■□□□□ 0.76
USP7Q93009 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.79■□□□□ 0.76
USP7Q93009 AC100791.3-201ENST00000617619 330 ntBASIC19.79■□□□□ 0.76
USP7Q93009 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 AL162377.1-201ENST00000618844 1793 ntBASIC19.79■□□□□ 0.76
USP7Q93009 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP7Q93009 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP7Q93009 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP7Q93009 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 UNC93B4-201ENST00000505679 747 ntBASIC19.78■□□□□ 0.76
USP7Q93009 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.78■□□□□ 0.76
USP7Q93009 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.78■□□□□ 0.76
USP7Q93009 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 AL121603.2-201ENST00000557373 2117 ntBASIC19.78■□□□□ 0.76
USP7Q93009 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
USP7Q93009 AC116050.2-201ENST00000612102 1779 ntBASIC19.78■□□□□ 0.76
USP7Q93009 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP7Q93009 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP7Q93009 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
USP7Q93009 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
USP7Q93009 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP7Q93009 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.77■□□□□ 0.76
USP7Q93009 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.77■□□□□ 0.76
USP7Q93009 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 AL596275.1-201ENST00000423464 877 ntBASIC19.77■□□□□ 0.76
USP7Q93009 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP7Q93009 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
USP7Q93009 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP7Q93009 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
USP7Q93009 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.76■□□□□ 0.75
USP7Q93009 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.76■□□□□ 0.75
USP7Q93009 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
USP7Q93009 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.76■□□□□ 0.75
USP7Q93009 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.76■□□□□ 0.75
USP7Q93009 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP7Q93009 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.76■□□□□ 0.75
USP7Q93009 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP7Q93009 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms