Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
DDX1Q92499 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
DDX1Q92499 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
DDX1Q92499 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX1Q92499 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
DDX1Q92499 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX1Q92499 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX1Q92499 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX1Q92499 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX1Q92499 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX1Q92499 PRORSD1P-201ENST00000295112 541 ntBASIC21.41■■□□□ 1.02
DDX1Q92499 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DDX1Q92499 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
DDX1Q92499 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.41■■□□□ 1.02
DDX1Q92499 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX1Q92499 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX1Q92499 MIR4758-201ENST00000577688 71 ntBASIC21.41■■□□□ 1.02
DDX1Q92499 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX1Q92499 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
DDX1Q92499 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX1Q92499 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX1Q92499 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DDX1Q92499 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DDX1Q92499 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX1Q92499 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
DDX1Q92499 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
DDX1Q92499 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX1Q92499 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DDX1Q92499 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.39■■□□□ 1.02
DDX1Q92499 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
DDX1Q92499 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX1Q92499 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX1Q92499 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
DDX1Q92499 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX1Q92499 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
DDX1Q92499 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 AL589743.5-201ENST00000616611 1050 ntBASIC21.39■■□□□ 1.01
DDX1Q92499 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.39■■□□□ 1.01
DDX1Q92499 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX1Q92499 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX1Q92499 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX1Q92499 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX1Q92499 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
DDX1Q92499 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX1Q92499 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
DDX1Q92499 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX1Q92499 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX1Q92499 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX1Q92499 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX1Q92499 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX1Q92499 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX1Q92499 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX1Q92499 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
DDX1Q92499 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX1Q92499 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX1Q92499 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.37■■□□□ 1.01
DDX1Q92499 RNA5SP413-201ENST00000516373 109 ntBASIC21.37■■□□□ 1.01
DDX1Q92499 AC105036.2-201ENST00000569468 176 ntBASIC21.37■■□□□ 1.01
DDX1Q92499 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX1Q92499 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX1Q92499 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX1Q92499 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms