Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 AC126544.1-201ENST00000580842 1059 ntBASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CKAP2Q8WWK9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CKAP2Q8WWK9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CKAP2Q8WWK9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CKAP2Q8WWK9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 KRT16P2-201ENST00000414673 1423 ntBASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms