Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EP400NL-214ENST00000641289 2402 ntBASIC24.6■■□□□ 1.53
SNED1Q8TER0 KRT18P22-201ENST00000402024 1347 ntBASIC24.6■■□□□ 1.53
SNED1Q8TER0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNED1Q8TER0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.6■■□□□ 1.53
SNED1Q8TER0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.6■■□□□ 1.53
SNED1Q8TER0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
SNED1Q8TER0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNED1Q8TER0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNED1Q8TER0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNED1Q8TER0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNED1Q8TER0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
SNED1Q8TER0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNED1Q8TER0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNED1Q8TER0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNED1Q8TER0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNED1Q8TER0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 NTF6B-201ENST00000591913 560 ntBASIC24.58■■□□□ 1.53
SNED1Q8TER0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.58■■□□□ 1.53
SNED1Q8TER0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNED1Q8TER0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.58■■□□□ 1.52
SNED1Q8TER0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SNED1Q8TER0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNED1Q8TER0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNED1Q8TER0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNED1Q8TER0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNED1Q8TER0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
SNED1Q8TER0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNED1Q8TER0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.56■■□□□ 1.52
SNED1Q8TER0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.55■■□□□ 1.52
SNED1Q8TER0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SNED1Q8TER0 AL137013.1-201ENST00000432946 1228 ntBASIC24.55■■□□□ 1.52
SNED1Q8TER0 C1QL1P1-201ENST00000568105 661 ntBASIC24.55■■□□□ 1.52
SNED1Q8TER0 WWOX-216ENST00000569818 525 ntBASIC24.55■■□□□ 1.52
SNED1Q8TER0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.55■■□□□ 1.52
SNED1Q8TER0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.55■■□□□ 1.52
SNED1Q8TER0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.55■■□□□ 1.52
SNED1Q8TER0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SNED1Q8TER0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 CR392000.1-201ENST00000624770 1228 ntBASIC24.54■■□□□ 1.52
SNED1Q8TER0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
SNED1Q8TER0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
SNED1Q8TER0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
SNED1Q8TER0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SNED1Q8TER0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SNED1Q8TER0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.53■■□□□ 1.52
SNED1Q8TER0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms