Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNIH3Q8TBE1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CNIH3Q8TBE1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNIH3Q8TBE1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNIH3Q8TBE1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNIH3Q8TBE1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 BX842568.3-201ENST00000418104 571 ntBASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNIH3Q8TBE1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 AL356441.2-201ENST00000443009 864 ntBASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNIH3Q8TBE1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 IGHV3-19-201ENST00000521488 291 ntBASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 MIR4466-201ENST00000606121 54 ntBASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNIH3Q8TBE1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 AC126544.1-201ENST00000580842 1059 ntBASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 AC105233.4-201ENST00000642045 216 ntBASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNIH3Q8TBE1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms