Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UBA3Q8TBC4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.27■■□□□ 1
UBA3Q8TBC4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBA3Q8TBC4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.27■□□□□ 0.99
UBA3Q8TBC4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
UBA3Q8TBC4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
UBA3Q8TBC4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 KRT18P6-201ENST00000555540 1265 ntBASIC21.25■□□□□ 0.99
UBA3Q8TBC4 AC092368.3-202ENST00000574180 1591 ntBASIC21.25■□□□□ 0.99
UBA3Q8TBC4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 AC112907.3-201ENST00000577781 2400 ntBASIC21.25■□□□□ 0.99
UBA3Q8TBC4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
UBA3Q8TBC4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 KRT8P17-201ENST00000453110 1448 ntBASIC21.24■□□□□ 0.99
UBA3Q8TBC4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 RNA5SP413-201ENST00000516373 109 ntBASIC21.24■□□□□ 0.99
UBA3Q8TBC4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
UBA3Q8TBC4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 AC060766.5-201ENST00000590539 871 ntBASIC21.23■□□□□ 0.99
UBA3Q8TBC4 AC006557.6-201ENST00000623071 864 ntBASIC21.23■□□□□ 0.99
UBA3Q8TBC4 HLA-B-256ENST00000639848 1089 ntBASIC21.23■□□□□ 0.99
UBA3Q8TBC4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 AC099778.1-201ENST00000568593 1911 ntBASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBA3Q8TBC4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms