Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 TSPY9P-201ENST00000440215 945 ntBASIC14.99□□□□□ -0.01
NUP35Q8NFH5 TSPY11P-201ENST00000442607 1045 ntBASIC14.99□□□□□ -0.01
NUP35Q8NFH5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 AC012354.3-201ENST00000623734 483 ntBASIC14.99□□□□□ -0.01
NUP35Q8NFH5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 LINC01465-201ENST00000408887 1940 ntBASIC14.99□□□□□ -0.01
NUP35Q8NFH5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP35Q8NFH5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 AP004607.4-201ENST00000530158 1459 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MIR6724-1-201ENST00000616420 92 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MIR6724-2-201ENST00000616483 92 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MIR6724-4-201ENST00000617390 92 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MIR6724-3-201ENST00000622482 92 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 MIR2861-201ENST00000636310 90 ntBASIC14.98□□□□□ -0.01
NUP35Q8NFH5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NUP35Q8NFH5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.97□□□□□ -0.01
NUP35Q8NFH5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 AC009237.3-201ENST00000393279 1427 ntBASIC14.97□□□□□ -0.01
NUP35Q8NFH5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
NUP35Q8NFH5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.96□□□□□ -0.01
NUP35Q8NFH5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms