Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN22Q8N7P3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN22Q8N7P3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 CDV3P1-201ENST00000471403 739 ntBASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN22Q8N7P3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN22Q8N7P3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 AL691432.2-201ENST00000607222 2038 ntBASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 PGM5P4-201ENST00000421970 445 ntBASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 MYCNOS-205ENST00000641950 531 ntBASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN22Q8N7P3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 AC026271.2-201ENST00000428091 497 ntBASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 KRT18P5-201ENST00000436075 1291 ntBASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN22Q8N7P3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms