Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.58■□□□□ 0.73
CPSF7Q8N684 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 AC005332.7-201ENST00000614046 2005 ntBASIC19.58■□□□□ 0.73
CPSF7Q8N684 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CPSF7Q8N684 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.58■□□□□ 0.72
CPSF7Q8N684 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.58■□□□□ 0.72
CPSF7Q8N684 AC008175.2-201ENST00000612840 297 ntBASIC19.58■□□□□ 0.72
CPSF7Q8N684 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.58■□□□□ 0.72
CPSF7Q8N684 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CPSF7Q8N684 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 AP000974.1-201ENST00000623909 2387 ntBASIC19.58■□□□□ 0.72
CPSF7Q8N684 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPSF7Q8N684 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 RAP2CP1-201ENST00000605103 478 ntBASIC19.57■□□□□ 0.72
CPSF7Q8N684 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 TNXA-203ENST00000507684 2038 ntBASIC19.57■□□□□ 0.72
CPSF7Q8N684 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
CPSF7Q8N684 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPSF7Q8N684 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.56■□□□□ 0.72
CPSF7Q8N684 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPSF7Q8N684 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 KRT18P11-201ENST00000435214 1283 ntBASIC19.55■□□□□ 0.72
CPSF7Q8N684 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 AL691432.2-201ENST00000607222 2038 ntBASIC19.55■□□□□ 0.72
CPSF7Q8N684 AC011767.1-201ENST00000617410 1153 ntBASIC19.55■□□□□ 0.72
CPSF7Q8N684 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPSF7Q8N684 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CPSF7Q8N684 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 HLA-L-209ENST00000420110 1011 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms