Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 BX276092.2-201ENST00000417668 665 ntBASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC116Q8IYX3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC116Q8IYX3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CCDC116Q8IYX3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 C2orf69P4-201ENST00000565394 541 ntBASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC116Q8IYX3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 NCF1B-203ENST00000435988 1254 ntBASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms